Gene Rpal_4680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4680 
Symbol 
ID6412366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp5040515 
End bp5040997 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID642714559 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_001993646 
Protein GI192293041 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCG AATCCGTTCG CGCCTGGTTC GCCCAACACG CCCCCGACAT CGCCGTCGAG 
GAATCGACGA TGAGTTCGGC AACCGTGCCG CTCGCTGCCG AAGCCTATGA CGTGCCTCCG 
GCGCAGATCG CCAAGACCCT CTCGTTGCGT GTCGGCGAGC GCGTGGTGCT GATCGTCACC 
AGCGGTACGA TGCGGCTCGA CAACAAGAAG GCGAAGGCAT TGCTCGGCGG CAAGCCGAAG 
ATGCTCGGCG TTCACGAGGT TGCCGATCTC ACCGGCCACG AGGTCGGCGG CGTCTGCCCG 
TTCGGACTCA AGGCGCCGCT GCCGATCTAT TGCGACGTCT CCCTGAAGGC GTACGACGTG 
GTCGTGCCGG CAGCCGGATC GACTCACAGC GCGGTGCGGA TCGCGCCGCA ACGAATGGCC 
GAGCTGGTCG GCGCCGAATG GGTCGATGTC TGTGAGGACC ACAGCGCGCC TGCGCAGCCG 
TGA
 
Protein sequence
MSLESVRAWF AQHAPDIAVE ESTMSSATVP LAAEAYDVPP AQIAKTLSLR VGERVVLIVT 
SGTMRLDNKK AKALLGGKPK MLGVHEVADL TGHEVGGVCP FGLKAPLPIY CDVSLKAYDV 
VVPAAGSTHS AVRIAPQRMA ELVGAEWVDV CEDHSAPAQP