| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4668 |
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| Symbol | |
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| ID | 6412354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5028430 |
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| End bp | 5030604 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714547 |
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| Product | Peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_001993634 |
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| Protein GI | 192293029 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.257633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGATC ACTCGACTGG ACGTCGCGGT TTCGAAGGCG TGCTGATGGC CGTCGCGGCG
ACCTTCCTCA CCGTGTCGGC GACCTCCGTC CTGGCGCAGT CGCCGACGCG GTCGCCCGCG
GATCTCGCGA TCGATGCCGC CGTCCCGGTG CCGAGCCCGG TCGATCTGCC GCCGCCCTCG
GTCGGTGACT TCAAGCCCGA GACCCCTGCC GCCAAGCCCG AGACAGCGGC CGTCCCTGCG
CCTGCCGAAC CGGCCAAGGA CGTTGCCGCC ACCCCGGCAC CGGCAGCCCC CGAACCGAGC
AAGGATACCG CGGCAACTGC GCCCGCGCCC GAGCCCAAAA TGGAAGCTCC GGCGGCCACC
GCCACCGCTC CTGCCGCCGT CCCCGCCAAG CCGGCCATCA ATCAGGCGGA GACCACCAAG
CCCGCCGAAC CGCAGAAGCC GGCCAGCACG GTTGCTGCTG CCGACCAGCC GGTGGCGGAG
CAGCTTCGCG ATCTGATCGC CAAGAGCGCG TCGCGCTACT TCGAGCGCAA GTCCGAGCGC
AGCGCGGTGG AGAAGTTCTA CGAGACCCGC GACTACGCAC CGGTGTGGAC CAAGGCCGGC
GCGCTGACCG CGCAGGCCAA GGGCGTGATC GCGCGGCTGA AGGACGCCGC GGCCGACGGC
CTCGATCCGG ACGACTATCC GGTGCCGAGC TTCACCGCCG CGACCTCGCC CGAAGCGCTG
GCGGAGGCGG AGCTGCGGCT CACCGAGAGC ATGATGGACT ATGCGCGTCA GGCGCAGAGC
GGCCGGATGC ACTGGTCGCA GGTGTCGGCC GACATCCAAT ATCCGGAGCA TCCGATCGAT
CCGGCCCAGG TGTTGGCGAA GGTCACCACC GCGGCCGACG CTTCCGCGGC GCTCGACAGT
TACAACCCGC CGCACAAGCT GTATCGCGAG CTGAAGAAGA AGCTCGCCGA GCTGCGCGGC
GAAGGCGACA AGCCGGTGAT CAAGATCGCC GACGGCGAGA CTCTGCGTTA TCAGCCGGCC
CGCAAGAAGC GCGCCGAAGT AAAGATGGAC GATCCGCGCG TGCCGCAGCT GCGCGCCCGC
CTCGGCGTCA CCGAGAACCC GGATAGCACC ACCTACGACG CGACGGTCGC GGCGGCGGTG
CGGAAATTCC AGGATCACGC CGACCTCAAG GCTAGCGGCG TGCTCGATGA GCGCACCGTC
AAGGCACTGA ACACGCCGAA GCGCGACCGC ACCATCGACA CCATCATCGT CAACATGGAA
CGCTGGCGCT GGCTGCCGCG CGATCTCGGC GCGCCGTCGC TCGGCGACGC CTATGTGATC
CTCAACATTC CGGACTACAC GCTGAAGGTG ATGCAGCACG GCGCCGAAGT GTGGACGACC
CGCGTCGTCA CCGGCAAGCC GGGCAAGCAC GCCACCCCGC TGCTGACGGA GACGATGAAG
TACATCACCG TCAACCCGAC TTGGAACGTG CCGCCGTCGA TCATCTACAA CGAGTATCTG
CCGGCGCTGC AGCAGGATCC CACCGTGCTC GACCGCATGG GCCTAAAGCT GGAGCGCAAT
CGCGACGGCT CTATCCACAT CTCGCAGCCG CCGGGAGAAG CCAACGCGCT CGGCCGCATC
CGCTTCAACT TCCCGAACAA GTTCCTGGTG TATCAGCACG ACACCCCGGA CAAGAATCTG
TTCGCCCGCG AGGAGCGCGC CTTCAGCCAC GGCTGCATGC GGGTGCAGAA CCCCGACGTG
TACGCCTCGA CGCTGCTGAA CATCGCGATG CCGGAGAAGG ACTACACCCC GGCCAAGGTC
CGGGCGATGT ACGGCCGCAG CGAGGTGGAT CTGAAGTTCC CGACCCCGAT CCCGGTCAAC
ATCACCTATC AGACCGCGTT CGTTGACGAC GCCGGCAAGT TGCAGCTCCG CAAGGACGTG
TACGGCCGCG ACGCGGCGAT GCTGGGGCTG CTCAAGAACG ACAAGGGCAA GAACCTGGAA
GCGGTGGTGG CGCACGCCCA GCCGAACTAC TCCCGCCCGA CCCGGCTGCC CGACGGGGTG
AGCGTCGCCG GCGACTACAC CGGCTCGTCG GGCGCCTCGT CGAGCCCGTT CTCGTTCCTG
GAGAACCTGT TCGGCGGCCC GCAGCCGCGT CAGCAGCCGG CTCAGCGCAA TCAGCGCCGG
GTTTACGCCC GCTGA
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| Protein sequence | MRDHSTGRRG FEGVLMAVAA TFLTVSATSV LAQSPTRSPA DLAIDAAVPV PSPVDLPPPS
VGDFKPETPA AKPETAAVPA PAEPAKDVAA TPAPAAPEPS KDTAATAPAP EPKMEAPAAT
ATAPAAVPAK PAINQAETTK PAEPQKPAST VAAADQPVAE QLRDLIAKSA SRYFERKSER
SAVEKFYETR DYAPVWTKAG ALTAQAKGVI ARLKDAAADG LDPDDYPVPS FTAATSPEAL
AEAELRLTES MMDYARQAQS GRMHWSQVSA DIQYPEHPID PAQVLAKVTT AADASAALDS
YNPPHKLYRE LKKKLAELRG EGDKPVIKIA DGETLRYQPA RKKRAEVKMD DPRVPQLRAR
LGVTENPDST TYDATVAAAV RKFQDHADLK ASGVLDERTV KALNTPKRDR TIDTIIVNME
RWRWLPRDLG APSLGDAYVI LNIPDYTLKV MQHGAEVWTT RVVTGKPGKH ATPLLTETMK
YITVNPTWNV PPSIIYNEYL PALQQDPTVL DRMGLKLERN RDGSIHISQP PGEANALGRI
RFNFPNKFLV YQHDTPDKNL FAREERAFSH GCMRVQNPDV YASTLLNIAM PEKDYTPAKV
RAMYGRSEVD LKFPTPIPVN ITYQTAFVDD AGKLQLRKDV YGRDAAMLGL LKNDKGKNLE
AVVAHAQPNY SRPTRLPDGV SVAGDYTGSS GASSSPFSFL ENLFGGPQPR QQPAQRNQRR
VYAR
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