Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4660 |
Symbol | |
ID | 6412346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 5019855 |
End bp | 5021258 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642714539 |
Product | NAD(P)(+) transhydrogenase (AB-specific) |
Protein accession | YP_001993626 |
Protein GI | 192293021 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.226968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCA ATCTTTCCGC ATTTCTGTAT CTGATCGCAG GCGTCCTGTT CATTCTGGCG CTGCGCGGTC TGTCGTCTCC GGCCACCAGC CGTCAGGGCA ACCTGATGGG CATGAGCGGC ATGGCGATCG CCATTGCCAC CACGCTCGCC GGCCATCCGC CGGCCGATCT GCTCGGCTGG GTGTTGGTGA TCGCCGGCAT CGCGATCGGC GGCTCCATCG GCGCAGTCAT CGCCAAGAAG GTGCCGATGA CCTCGATGCC CGAGCTGGTC GCCGCCTTCC ACTCGCTGGT CGGTATGGCC GCGGTGTTGG TCGCCGCCGG TGCGTTCTAT GCGCCGGGTG CGTTCGACAT CGGCGAGCCG GGCAACATCC ATGCCCAGAG CCTCGTTGAA ATGTCGCTCG GCGTCGCCAT CGGCGCGCTG ACCTTCACCG GTTCGGTGAT CGCGTTCCTC AAGCTGTCGG GCCGCATGAG CGGCGCGCCG ATCCTGCTGC CGGCTCGGCA CGTGGTGAAC ATCGCGCTCG GCGTCATCAT GTTCGCGGCG ATCATCTACA TGGTGATCAC GCAGAGCGAG GTCGCCTTCT GGGTGATCAC CGGCGTCGCG CTGCTGCTCG GCATCCTGAT CATCGTCCCG ATCGGCGGCG CCGACATGCC GGTGGTGATC TCGATGCTCA ACTCCTACTC GGGGTGGGCC GCGGCCGGCA TCGGCTTCAC GCTCGGCAAC TCGGCGCTGA TCATCACCGG CGCGCTGGTC GGCTCCTCGG GTGCGATTCT GTCCTACATC ATGTGTAAGG GCATGAACCG CTCGTTCATC TCGGTGATCC TCGGCGGCTT CGGCGGTGAA ACCGCGGCGG CCGGCGGTGG TGGCGGCGAA CAGCGCCCGG CCAAGCTCGG CTCGGCGGAC GACGCGGCCT TCATCATGAA GAACGCCTCG AAGGTCATCA TCGTGCCGGG TTACGGCATG GCGGTTGCCC AGGCTCAGCA CGCGCTGCGT GAAATGGCCG ACTCGCTGAA GAAGGAAGGC GTCGAGGTGA AGTACGCGAT TCACCCGGTC GCCGGCCGTA TGCCGGGCCA CATGAACGTG CTGCTCGCCG AAGCCAACGT GCCGTACGAC GAGGTGTTCG AACTCGAGGA CATCAACTCG GAGTTCGCGC AGGCCGACGT CGCGTTCGTG ATCGGCGCCA ACGACGTCAC CAACCCGGCG GCCGAAGAGG ATCCGTCCTC GCCGATCTAC GGCATGCCGG TGCTGCAGGT GTGGAAGGCC GGCACCGTGA TGTTCATCAA GCGGTCGCTC GCCTCCGGTT ACGCCGGCAT CGACAACCCG CTGTTCTATC GCGACAACAC CATGATGCTG CTCGGCGACG CCAAGAAGAT GACCGAGAAC ATCGTCAAGG CGATGGCGCA CTAA
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Protein sequence | MSANLSAFLY LIAGVLFILA LRGLSSPATS RQGNLMGMSG MAIAIATTLA GHPPADLLGW VLVIAGIAIG GSIGAVIAKK VPMTSMPELV AAFHSLVGMA AVLVAAGAFY APGAFDIGEP GNIHAQSLVE MSLGVAIGAL TFTGSVIAFL KLSGRMSGAP ILLPARHVVN IALGVIMFAA IIYMVITQSE VAFWVITGVA LLLGILIIVP IGGADMPVVI SMLNSYSGWA AAGIGFTLGN SALIITGALV GSSGAILSYI MCKGMNRSFI SVILGGFGGE TAAAGGGGGE QRPAKLGSAD DAAFIMKNAS KVIIVPGYGM AVAQAQHALR EMADSLKKEG VEVKYAIHPV AGRMPGHMNV LLAEANVPYD EVFELEDINS EFAQADVAFV IGANDVTNPA AEEDPSSPIY GMPVLQVWKA GTVMFIKRSL ASGYAGIDNP LFYRDNTMML LGDAKKMTEN IVKAMAH
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