Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4574 |
Symbol | |
ID | 6412258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4927559 |
End bp | 4928632 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642714454 |
Product | inner-membrane translocator |
Protein accession | YP_001993543 |
Protein GI | 192292938 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATG CTTCCCTGAT CCCCGCCGGC GATTTCCGCA CCTCCTACGC CGCCGACACC ACGATCTTCC CGACCAGGAC CAGCCGCAAC GCGGCGATCC TCGGCATCGT GCTGGTGTGC TTCGCGCCGC TGGTGCTGTC GGGCTATTGG CTCAGCATCC TGATCCAGAT CGGGATCTTC GGCATCGCCG CGCTCGGGCT GAACATCCTG GTCGGCTTCA CCGGCCAGAT CTCGATCGGT CACGCCGCGT TCTTCCTGCT CGGCGCCTAC ACCTCGGCCT ATCTGAACAA CCACTTCCCG ATCCCGGTGT TCTTCGCGAT TCCGCTCGCC GGGCTCGTCA CCGCGCTGGT CGGGCTGGTG TTCGGCGTGC CGGCGGCCCG GCTGAAAGGT CTGTATCTCG TGATCGCCAC GCTGGCGGCG CAGTACATCC TGATCGACTT CTTCTCGCGC GCCGAATGGT TCTCAGGCGG CTCGGTGCCG GCGATGGCCA ATCCGTTCTC GCTGTTCGGG TACGTCCTGC AGGGCGACAA GCAATATTTC TACGTCGTGC TGGCGTATCT GCTGGTCAGC TACATCCTGG TGACCAACCT GATGCGCACC CGCGACGGCC GTGCCTTGGT GGCGGTGCGC GACCATTATC TCTCGGCCGA GATCATGGGG ATCAACCTCA CGAAATATCG GACGCTTTCG TTCGCGCTTG CGGCGTTCTT TGCCGGCATC GCCGGCGCGC TGTACGCGCA TTACCAGCTC GTCGTCTCCA ACGAGGGCTT CGGCATCGAG CGTTCGATCC TGTTCCTGGC GATGATCATC ATCGGCGGCA TCGGCTCGAT CTCGGGCACG CTGATGGGCA CTGCCTTCGT GGTGCTGCTG CCGGAGACGA TGGAATGGCT CAGCAGTGGC CTGAAAGGCA GCGCAATCGA TCGCGCGCTG GAGCTCAACA ACAACCTGAC CTTCCTGCGC GAAATCGCAA TCGGCCTGAT TATCATCCTG TTCCTGGTGT TCGAGCCCGA TGGGCTGGCG CACCGCTGGC GGCAGATCAA GGCGTATTGG AAACTCTACC CGTTCTCGCA TTGA
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Protein sequence | MANASLIPAG DFRTSYAADT TIFPTRTSRN AAILGIVLVC FAPLVLSGYW LSILIQIGIF GIAALGLNIL VGFTGQISIG HAAFFLLGAY TSAYLNNHFP IPVFFAIPLA GLVTALVGLV FGVPAARLKG LYLVIATLAA QYILIDFFSR AEWFSGGSVP AMANPFSLFG YVLQGDKQYF YVVLAYLLVS YILVTNLMRT RDGRALVAVR DHYLSAEIMG INLTKYRTLS FALAAFFAGI AGALYAHYQL VVSNEGFGIE RSILFLAMII IGGIGSISGT LMGTAFVVLL PETMEWLSSG LKGSAIDRAL ELNNNLTFLR EIAIGLIIIL FLVFEPDGLA HRWRQIKAYW KLYPFSH
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