| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4563 |
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| Symbol | |
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| ID | 6412247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4914451 |
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| End bp | 4915296 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714443 |
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| Product | Uroporphyrinogen III synthase HEM4 |
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| Protein accession | YP_001993532 |
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| Protein GI | 192292927 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.20438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAC GGCTCCAAGG CACCCGTATC CTGATCTTGG AGACCCGCGA GGAGGCCCAG
TTCGCCCGGC TGCTGACCGA ACAGGGCGCC GACGTCCTGC AGTGCCCGAT GTTCGAAATC
CGCGATGCGC CCGACCCCGC TCCGGTCTCG GCCTGGATCG ACCGGCTGAT CGCCGCGCCG
TTCGACGATC TGGTGCTGCT GACCGGCGAG GGGTTGCGGC GGCTGACCAA GCTGGCCCGA
GCGACCGACC GCGAACGGCC TTTCGTGGCG GCCGTGGGCC GGACGCGAAC GTTCATCCGC
GGGCCCAAGC CAGGCCGAGC GTTGCGCGAG ATCGGGCTGG AGCCGCAGGT GACTGCCGAA
GCACCGACCT CCGAGGGCAT CGCCGCCACG CTGAAACGCT ATGATCTCGC CGGGCGCCGG
ATCGGCGTTC AGCTCTATCC CGAACGTGAC CACGCCGCTT TGCTCGATTC CATTACGGCG
CAAGACGCCA CCGTCGATGC GGTGCTGCCT TATTCCTACG ACGCGCGTGC GGCCGAACAG
ACCGTCGTCA CTGCCGTCGA GGAGATGGCG CAAGGCCGCG TCGATGCGCT GGCGCTGACC
AGTTCCGGTC AGGTCCGACG GCTGTTCGAC GTCGCCCGCG CGCACAATCG CGAAGACCGA
CTGCGCGACG GGTTAAGCCG CACGCCGATC GCCTCGGTCG GTCCGGTGGT GACCGAGGAA
CTTGCCGCGC ACGGCTTCGC GCCGACCATC ACCCCCGCCA ATGAGGCATT CTTCATGAAG
CCGCTGATCA GCGCGATGAT CGTCGCACTC GGCGGACGCA CGCCACGCAA CACAGCGGCA
GGTTGA
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| Protein sequence | MAERLQGTRI LILETREEAQ FARLLTEQGA DVLQCPMFEI RDAPDPAPVS AWIDRLIAAP
FDDLVLLTGE GLRRLTKLAR ATDRERPFVA AVGRTRTFIR GPKPGRALRE IGLEPQVTAE
APTSEGIAAT LKRYDLAGRR IGVQLYPERD HAALLDSITA QDATVDAVLP YSYDARAAEQ
TVVTAVEEMA QGRVDALALT SSGQVRRLFD VARAHNREDR LRDGLSRTPI ASVGPVVTEE
LAAHGFAPTI TPANEAFFMK PLISAMIVAL GGRTPRNTAA G
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