| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4548 |
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| Symbol | |
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| ID | 6412232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4899887 |
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| End bp | 4901197 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714428 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_001993517 |
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| Protein GI | 192292912 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA CGATGATTGG GACGGGTTAT GTGGGGCTGG TGTCCGGGGC ATGCTTCGCG
GACTTCGGCC ACCAGGTAAC CTGCGTCGAC AAGGATGCCG GCAAAATCGC GGCCCTGCAT
CGGGGCGAAA TTCCCATTTA CGAACCGGGC CTTGACGAGC TGGTCGCGGC CAACGTCAAG
GCTGGGCGGC TCGACTTTAC CACCGACCTG ACCGCCCCGG TGGGCGAAGC GGACGCAGTG
TTCATCGCCG TCGGGACCCC GTCACGGCGC GGCGACGGCC ACGCTGACCT ATCCTATGTG
TATGCGGCCG CAAAGGAAAT CGCCGCCGCC CTGAAAGGCT TCACGGTCGT GGTGACCAAG
TCGACGGTCC CGGTCGGCAC CGGCGACGAG GTCGAGCGGC TGATCCGCGA GACCAATCCC
ACCGCCGACG CGGCGGTCGC CTCGAACCCT GAATTCCTGC GCGAGGGCGC CGCGATCCGC
GACTTCAAGT TCCCCGACCG CATCGTGATC GGGACTGCCG ACGAGCGCGC CCGCAAAGTG
ATGGGCGAGA TCTACCGCCC GCTGTCGCTG AACCAGGGCC CGCTGATGTA CACCGCGCGG
CGCACCGCCG AGCTGATCAA ATACGCCGCT AACGCATTCC TGGCGACCAA GATTACCTTC
ATCAACGAGA TGGCGGACCT CGCCGAAAAG GTCGGCGCCG ACGTCCAGGA CGTCGCCCGC
GGCATCGGCA TGGACAACCG GATCGGCTCC AAATTCCTGC ATGCCGGCCC CGGCTTCGGC
GGCTCGTGCT TCCCCAAGGA CACCCGCGCG CTGGTGCAGA CCGCCCATGA CCACGACGTA
CCGGTGCGGA TCGTCGAGGC GGTCCTTGCC GTCAACGACA ACCGCAAGCG CGCAATGGCC
CGCAAGGTCT CGCACGCGCT CGGCGGCAAC ATGCGCGGCA AGACCATCGC GGTGCTCGGC
CTGACCTTCA AGCCGGACAC CGACGACATG CGCGAGGCGC CGTCGATCCC GCTCGTCACC
GGCCTCACCG ACATGGGCGC CAAGGTGAAG GCGTTCGATC CCGCCGGCAT GGCGCAGGCC
AAGGCGGAGT TGCCGGACAT CACCTACTGC GAGGACGCCT ACGACTGCGC CAAGGGCGCC
GACGCGCTAG TGATCGTCAC CGAATGGGTG CAATTCCGCG CGCTCGACCT GCCGCGGCTG
AAAGCCGCAA TGGCGCAGCC GATCGTCGTC GACCTGCGCA ACATCTACCG CCCCACCGAA
ATGGCCGAGC ACGGCTTCAG TTATCACAGC GTCGGCCGCG GCGACGCGTA G
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| Protein sequence | MRITMIGTGY VGLVSGACFA DFGHQVTCVD KDAGKIAALH RGEIPIYEPG LDELVAANVK
AGRLDFTTDL TAPVGEADAV FIAVGTPSRR GDGHADLSYV YAAAKEIAAA LKGFTVVVTK
STVPVGTGDE VERLIRETNP TADAAVASNP EFLREGAAIR DFKFPDRIVI GTADERARKV
MGEIYRPLSL NQGPLMYTAR RTAELIKYAA NAFLATKITF INEMADLAEK VGADVQDVAR
GIGMDNRIGS KFLHAGPGFG GSCFPKDTRA LVQTAHDHDV PVRIVEAVLA VNDNRKRAMA
RKVSHALGGN MRGKTIAVLG LTFKPDTDDM REAPSIPLVT GLTDMGAKVK AFDPAGMAQA
KAELPDITYC EDAYDCAKGA DALVIVTEWV QFRALDLPRL KAAMAQPIVV DLRNIYRPTE
MAEHGFSYHS VGRGDA
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