| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4507 |
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| Symbol | |
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| ID | 6412191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4852879 |
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| End bp | 4854351 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714389 |
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| Product | rfaE bifunctional protein |
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| Protein accession | YP_001993478 |
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| Protein GI | 192292873 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGCT TCGACGCCCT GCTGCAAGCG ATCGCTCGTC AGACCGTCCT GTGTGTCGGC
GATCTGATGC TCGACGAGTT CGTCTATGGC GAGGTGTCGC GGATTTCTCC GGAAGCTCCG
GCACCGGTGA TAGCGGTTCA GCGCAGCGAG ACCAATATCG GCGGTGCCGG CAACGTCGCC
CGTAATATCG CGGCGATCGG CGCCCGCTGC ATCTTCGTCG GCCTGATCGG TGATGACGCC
ACCGGGCGAT TTTTGGAATC CGAACTCGGC AGCGAGTCGC GGATCGAGCC CGTGCTGGTG
TGCGATGGCT CGCGGCCGAC GACCCGGAAA GTGCGGTTCG TCTCCGAGCA TTTCTCGACC
CATATGCTGC GTGCCGATTG GGAGACAGCG TCGCCGGCCG CTGCGGACAT CGAGCAACGT
TTGCTCGATG CGATCCTGCC TCAGCTCGCT CGTGCCGACA TCGTACTGCT GTCGGACTAC
GCCAAAGGCG TGCTGACAGC GCGGGTCATT CGCGACACGA TCGATGCCGC CAAAAAACTC
GGCAAGCGGG TGATCGTCGA TCCGAAAAGC GCCAACTTCG CGATCTATCG CGGCGCCACG
CTGCTGACGC CGAACCGCAA GGAATTCACC GCGGCGACGC GAAGTGCAGC AGCGACCGAT
GACGAGATTG CCGCGGCGGC TCAGGACGCG ATGGCGCTCG CCGAATGCGA GGCGATGCTG
GTGACCAAGA GCGAGCACGG CATGACGCTG GTACCGCGTG GGGGCGAGCC GATCCACGTG
CCGGCGCTGC CGGTAAAGGT GCGCGACGTC TCCGGCGCCG GCGATACGGT GGCGGCCGTG
CTGGCGGTAG TGCTGGCTTC GGGGGCGAAC TGGGCGGCCG CAATGCGGGC GGCGAGTGCG
GCTGCGGCGG TGGCGGTCAG CAAGAATGGC ACCGCGGTGG TGACGCCGGC GGAACTACGC
CGGCGGATCC TGCCGCATGC CTCACTGGCG GCGGAAGAGA AGATCATCGG CAGCGATGCG
GAGCTCGACG AGCGGCTGAA ACAGTGGCGC CGCGAGGGCC TTCGGGTCGG CTTCACCAAC
GGCTGCTTCG ACATTCTGCA CCCCGGGCAC GTCAAGGTGC TGACCGCAGC GCGCGGCGCC
TGCGACCGGC TGATCGTCGG GCTGAACAGC GACGCTTCGG TGCGTCGGCT GAAGGGTGAG
AGCCGGCCGG TCCAGCACGA ACGCGCCCGT GCCGAGGTGC TGGCCGCGTT GGAAGCAGTC
GATCTGGTGG CGATCTTCGA AGAAGATACC CCGCTCCGGC TGATTACGCG GATCGAGCCG
AGTGTGTTGG TCAAAGGCGG CGACTACACG CGCGAACAGG TGGTCGGACA CGAGATCGTC
GCGGCCAAAG GCGGCGACGT GCTGCTGGTC GACGTGCTGC CCGGTTTCAG CACCACCTCG
CTGGTGGCGC GGGCGCGCGA AGGGCAGTCC TGA
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| Protein sequence | MFSFDALLQA IARQTVLCVG DLMLDEFVYG EVSRISPEAP APVIAVQRSE TNIGGAGNVA
RNIAAIGARC IFVGLIGDDA TGRFLESELG SESRIEPVLV CDGSRPTTRK VRFVSEHFST
HMLRADWETA SPAAADIEQR LLDAILPQLA RADIVLLSDY AKGVLTARVI RDTIDAAKKL
GKRVIVDPKS ANFAIYRGAT LLTPNRKEFT AATRSAAATD DEIAAAAQDA MALAECEAML
VTKSEHGMTL VPRGGEPIHV PALPVKVRDV SGAGDTVAAV LAVVLASGAN WAAAMRAASA
AAAVAVSKNG TAVVTPAELR RRILPHASLA AEEKIIGSDA ELDERLKQWR REGLRVGFTN
GCFDILHPGH VKVLTAARGA CDRLIVGLNS DASVRRLKGE SRPVQHERAR AEVLAALEAV
DLVAIFEEDT PLRLITRIEP SVLVKGGDYT REQVVGHEIV AAKGGDVLLV DVLPGFSTTS
LVARAREGQS
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