Gene Rpal_4496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4496 
Symbol 
ID6412180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4837974 
End bp4838423 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content60% 
IMG OID642714378 
Productcytochrome c prime 
Protein accessionYP_001993467 
Protein GI192292862 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.609438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACGCA CTGTGATCGT TGCCGGAGCC CTGGTGTTGA CGGCGAGCGC CGTGATGGCG 
CAGCAGGATC TGGTCGATAA GACCCAGAAA CTGATGAAGG ATAACGGCCG GAACATGATG
GTGCTCGGCG CCATCGCCAA GGGCGAGAAG CCCTACGATC AAGCCGCGGT CGACGCGGCG
CTGAAGCAGT TCGACGAGAC CGCCAAGGAT CTGCCGAAGC TGTTTCCGGA CAGCGTCAAA
GGGTTGAAGC CGTTCGACAG CAAGTACAGC TCATCACCGA AGATCTGGGC TGAGCGCGCC
AAGTTCGACA CCGAGATCGC CGATTTCGCC AAGGCGGTCG ACGGCGCCAA GGGCAAGATC
AAAGACGTCG ACACGTTGAA GGCCGCGATG CAGCCGATCG GCAAGGCGTG CGGAAACTGC
CACGAGAACT TCCGCGATAA GGAAGGCTAA
 
Protein sequence
MLRTVIVAGA LVLTASAVMA QQDLVDKTQK LMKDNGRNMM VLGAIAKGEK PYDQAAVDAA 
LKQFDETAKD LPKLFPDSVK GLKPFDSKYS SSPKIWAERA KFDTEIADFA KAVDGAKGKI
KDVDTLKAAM QPIGKACGNC HENFRDKEG