Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4496 |
Symbol | |
ID | 6412180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4837974 |
End bp | 4838423 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642714378 |
Product | cytochrome c prime |
Protein accession | YP_001993467 |
Protein GI | 192292862 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.609438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACGCA CTGTGATCGT TGCCGGAGCC CTGGTGTTGA CGGCGAGCGC CGTGATGGCG CAGCAGGATC TGGTCGATAA GACCCAGAAA CTGATGAAGG ATAACGGCCG GAACATGATG GTGCTCGGCG CCATCGCCAA GGGCGAGAAG CCCTACGATC AAGCCGCGGT CGACGCGGCG CTGAAGCAGT TCGACGAGAC CGCCAAGGAT CTGCCGAAGC TGTTTCCGGA CAGCGTCAAA GGGTTGAAGC CGTTCGACAG CAAGTACAGC TCATCACCGA AGATCTGGGC TGAGCGCGCC AAGTTCGACA CCGAGATCGC CGATTTCGCC AAGGCGGTCG ACGGCGCCAA GGGCAAGATC AAAGACGTCG ACACGTTGAA GGCCGCGATG CAGCCGATCG GCAAGGCGTG CGGAAACTGC CACGAGAACT TCCGCGATAA GGAAGGCTAA
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Protein sequence | MLRTVIVAGA LVLTASAVMA QQDLVDKTQK LMKDNGRNMM VLGAIAKGEK PYDQAAVDAA LKQFDETAKD LPKLFPDSVK GLKPFDSKYS SSPKIWAERA KFDTEIADFA KAVDGAKGKI KDVDTLKAAM QPIGKACGNC HENFRDKEG
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