| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4493 |
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| Symbol | |
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| ID | 6412177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4835820 |
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| End bp | 4836620 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714375 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001993464 |
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| Protein GI | 192292859 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATTC CGATCGCACT CACCATCGCC GGCTCCGACT CCGGAGGCGG CGCCGGCATT
CAGGCCGATC TCAAGTCGTT TTCCGCAAAC GGCGTCTATG GCGCCTCGGT GATCACCGCG
CTGACCGCGC AGAACACCCG CGGCGTCACC GCGATCCACG ACGTGCCGGC CGCGTTCGTC
ACCGCGCAGA TCGATGCGGT GTTCAGCGAT CTCGACGTCG CCGCCACCAA GATTGGAATG
GTGGCGCAGC GCGGGGTGAT CGCCGCGATC GCCGAAGGGC TGGATCGCTG GCACGCCGCC
AACGTCGTGC TCGATCCGGT GATGGTCGCA ACCTCGGGCG ATCGGTTGAT CGCCGACGAC
TGCGTCGACG CGCTGCGCAC GGTGCTGATC CCGCGCGCCC GGATCATCAC GCCGAACCTG
CCGGAAGCCG CCGCGCTGCT CGACGAGCCG GTCGCCGACG AGCCGGCAGA AATCGAACGC
CAGGGCCGGC ATCTGCTCGC GCTCGGCTGC GAAGCGGTCC TGATCAAAGG GGGACACGGC
ACCGGACCGA CCAGCACCGA TTACCTGTTC GTGGGAACCG AGGTGCAGGC GCTGTCCGCA
CCGCGGATCG TCACCAACAA CACCCACGGT ACCGGCTGCT CGCTGTCCTC CGCGATCGCC
GCCAATCTGG CGAAAGGCCA GTCGTTACAG GCCTCTGTGG CCGCCGCCAA ACAATGGGTC
AGCGCCGCCA TCGCAGCTGC GGATCGGCTT TCGGTCGGGC ATGGCCACGG CCCGATCCAT
CATTTCCACG GCTTCGACTA A
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| Protein sequence | MAIPIALTIA GSDSGGGAGI QADLKSFSAN GVYGASVITA LTAQNTRGVT AIHDVPAAFV
TAQIDAVFSD LDVAATKIGM VAQRGVIAAI AEGLDRWHAA NVVLDPVMVA TSGDRLIADD
CVDALRTVLI PRARIITPNL PEAAALLDEP VADEPAEIER QGRHLLALGC EAVLIKGGHG
TGPTSTDYLF VGTEVQALSA PRIVTNNTHG TGCSLSSAIA ANLAKGQSLQ ASVAAAKQWV
SAAIAAADRL SVGHGHGPIH HFHGFD
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