Gene Rpal_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4466 
Symbol 
ID6412150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4801591 
End bp4802682 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID642714348 
Producthypothetical protein 
Protein accessionYP_001993437 
Protein GI192292832 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGAC TGCTGAGCGC GCTGGGGCGT GGCTTCAAGA CGTATATCGG CTGGAAACGT 
GTCGGTATCG TCGCCAGCAT CCTGATTATC GGCTTTGCGA TTTCGTCGCT GATCCGCACC
CTCAAGGGGG TCGATCACAA CGTCATCCTG ACCGCGCTGA CCGACAAGAG CCCGACCCAG
ATCGGGATGG CGGCGCTCTG TGTTGTCGGT GCGTTCTGCA CCCTGACGTT CTACGATTTC
TTTGCGCTAC GCACGATCGG CAAGCTGCAT GTGCCGTACC GCATCGCCGC GATGTCGGCG
TTCACCTCCT ACGTCATCGG GCACAACCTC GGCGCCACGG TGTTCACCGG CGGCGCGATC
CGGTTCCGGA TCTATTCGGA CTACGGCCTG TCCGCGATCG ACGTCGCCAA GATCTGCTTC
ATCTCCGGCC TGACATTCTG GCTCGGCAAT CTGTTCGTGC TCGGCATCGG CATGATCTGG
CATCCAGCCG CGGCGAGCGC GATGGACCTG CTGCCCGACC AGATCAACCG GCTGATCGGC
GTCGCCTGTC TGGCCGGTAT CGCCGCCTAT TTCATCTGGC TCGCGACCGG CAAGAAGCGC
CGCGAGCTCG GCCAGAACGG CTGGAAGGTG GTGCTGCCGT CGGCCAAGCT GACGCTGGTG
CAGGTGCTGA TCGGCGTGGT CGACCTCGGC TTCTGCGCGC TGGCGATGTA CCTGTTGATG
CCGTCCGCCC CCTACATCGA CTACGTGTCG CTGGCGGTGG TGTTCATTCT CGCCACCCTG
CTCGGCTTCG CCAGCCACGC TCCGGGCAGC CTCGGCGTGT TCGACGCCGC GATGCTGGTG
GCGCTGCCGA TGTTCGCCCG CGAGGACGTC ATCGCCACAC TGTTGATCTA CCGCGTGCTG
TACTTCCTGC TGCCGTTCGG GATCGCGATC TCGATTATGG GGGTGCGGGA AATCTGGCTG
AGCGTGATCA AACCGTGGCA GGAACGCCGC GCAGCCTGCA ACGGCAACGA GCACGCGGCG
ACCGCCGCTC CGGCCGCGGC GCCCGCCCGG GCTCCGGTCG GCCAGGTTGT ACAGCGCTCC
TCCAAGCTCT GA
 
Protein sequence
MHRLLSALGR GFKTYIGWKR VGIVASILII GFAISSLIRT LKGVDHNVIL TALTDKSPTQ 
IGMAALCVVG AFCTLTFYDF FALRTIGKLH VPYRIAAMSA FTSYVIGHNL GATVFTGGAI
RFRIYSDYGL SAIDVAKICF ISGLTFWLGN LFVLGIGMIW HPAAASAMDL LPDQINRLIG
VACLAGIAAY FIWLATGKKR RELGQNGWKV VLPSAKLTLV QVLIGVVDLG FCALAMYLLM
PSAPYIDYVS LAVVFILATL LGFASHAPGS LGVFDAAMLV ALPMFAREDV IATLLIYRVL
YFLLPFGIAI SIMGVREIWL SVIKPWQERR AACNGNEHAA TAAPAAAPAR APVGQVVQRS
SKL