| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4439 |
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| Symbol | |
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| ID | 6412123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4766085 |
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| End bp | 4768232 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714321 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_001993410 |
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| Protein GI | 192292805 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCCG GACGCAGCAA GGCAATTTCC TCCCGCAATG CCTCTGACAA GGCTTACGAG
CCCGCGGTGC TGCTGATGCG TGCGCGTGTG CTCCATCAGC AGGGCCAGCT CGACGAGGCG
CGCTCCGCCT ATAAGAAGGT GCTGAAGAAG GCGCCGGACA ATTTCATGGC GCTGCACTTC
TACGCACTCG CCGAATATCA GAGCGGCAAC GCCGAACTGG GCATCAAGAC GCTGAAGCGT
GCGCTACTGG CCGATCCGAA ATCGGCGCAG GCGCAGTCCG ACATGGGCAG CATGCTGATT
GCCGTCGGCC GCTTCGCGGA CTCTCTGGCG TCGTGCGACA AAGCGATCGC AATCGATCCG
ACACTGATGC TGGCTTACGC CAATCGCGGC CTCGCCCTCT CCGCTCTCGC CCGCTACGAA
GACGCGATCG CCAGCTTCGA CAAGGCGATC GAACTGATGC CGGATCGCGC CGATACCTGG
AACGATCGCG GCAACGCGCT GCATAAGCTA GGACGCTACA CCGAAGCGCT GGAGAGCTAC
GACAAGGCGA TCGAGATCGA TCCTCTCAGC GACGTCGCCT TCATGAACCG CGCCGGCACC
TACAAGGATC TGAAACAGCT CGACAAGGCC CTGGCGAGTT ACGACCGCGC GCTGTCGATC
GGCAAGCGGC CGGTCCAAGC CGGCCTCGCC CGCGCCGAAA CCCTGCTGTT CATGCGCAAC
GTCAAGGACG CGATGGCGAC CTGCACCGCG GTGCTGAAGG TCGAGCCGAA CTCGGCAATC
GCGCTTACGC TGCTCGGCAA CTGCATGGCG TCGCTCGGCG ATGCCGAGAC CGCAATCGCC
TTGCACAGCC GCGCCCTGGA GCTGATGCCG AACTACGAAG CGGCAATCTC CAGCAAGATC
TTTTCGATGG ACTTCTGCGC AGGCTCCGAC GTCGGGGCAC AGCAGGCAGT TCGCAGCAGC
TGGTGGACGC AGATCGGCGC GCCGATCTAC CGCGCCTGCG CCACTCCACC GACCAACGAC
CGCGATCCCG ACCGGCGCCT GGTGGTCGGC TACGTCTCGG CCGACTTCCG TGCGCATTCG
GCGGCGTTCT CGTTCCGCCC GGTGATCGAG CATCACGACC ACAGCCAGTT CGAAGTGGTG
CTGTATTCCG GCGTGGTGGT GCCCGACGAT TCCACTCGAG CCTTCGAAGT GATCGCCGAC
AAATGGCGCG ACGCGACGTT GATGAGCGAC CAGGGGCTCG CCGACCAGAT TAAGGAAGAC
AAAGTCGATA TTCTGGTCGA CCTGTCCGGC CACTCCAACG GCAACCGGCT GCGCGTGTTC
GCCCGCAAGC CGGCTCCGGT GCAGGTCACC GCCTGGGGCC ACGCCACCGG CACAGGTCTT
CCGGTAATGG ACTATCTGCT CGGAGACCCG GTGGCGATCC CGGTCGAAGA TCGTCACTTT
TATGCCGAAG CGGTCTATGA CCTGCCGTCG ATCGTCATCA TCGAGCCGGT GCCGCAGCAA
TGGCGCTCGC TCGAACTACC GTTCGACCGC AATGGCTACC TGACCTACGG CTCGCTGAAC
CGCATTTCGA AAATCTCGGA CGCGGCGATC GAGGTGTGGT CGCAGGTGCT CGCCGCGTCG
CCAACGTCGC GGCTGATCCT GAAAGACCAT CAGATCGACG ACCCCGCGGT GCGGCAGACA
CTGCTGGAGA AATTCGGCGC GCGCGGCATC GCCGACGGCC GCATTACCTT GCTGGGCTCG
AGCTCGCGCC AGGATCACCT GGAAACGCTG AAGCAGATCG ATCTCTGCCT CGATCCGTTC
CCGCAGGCTG GCGGCGTCTC GACCTGGGAA GCTCTGCATA TGGGCGTTCC GGTGGTCAGC
CGGCTCGGCC ACACCGTCCC CAGCCGGGTC GGCTGTGCGG TACTCGCCGC CGCCGGGCTG
CCGGATTTCA TCGCGCCCAA CGACACGCGC TACATCGAAA TCGCCAGCAA GCCGGACCTT
GAGCGGCTAC GTTCGATCCG CCGCGGGCTG CGCGATTTCA TCCTGCAGCG CTGCGGCCCG
GCCGCTTACA CCCGCGCGGT CGAAGAGGCG TACCGGACGA TGTGGAAGCG CTGGTGCGCC
GCCCCGTTCG ATGAAGCCAA GGACCGGGCC CTGCGCCGCG GGCGCTGA
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| Protein sequence | MQPGRSKAIS SRNASDKAYE PAVLLMRARV LHQQGQLDEA RSAYKKVLKK APDNFMALHF
YALAEYQSGN AELGIKTLKR ALLADPKSAQ AQSDMGSMLI AVGRFADSLA SCDKAIAIDP
TLMLAYANRG LALSALARYE DAIASFDKAI ELMPDRADTW NDRGNALHKL GRYTEALESY
DKAIEIDPLS DVAFMNRAGT YKDLKQLDKA LASYDRALSI GKRPVQAGLA RAETLLFMRN
VKDAMATCTA VLKVEPNSAI ALTLLGNCMA SLGDAETAIA LHSRALELMP NYEAAISSKI
FSMDFCAGSD VGAQQAVRSS WWTQIGAPIY RACATPPTND RDPDRRLVVG YVSADFRAHS
AAFSFRPVIE HHDHSQFEVV LYSGVVVPDD STRAFEVIAD KWRDATLMSD QGLADQIKED
KVDILVDLSG HSNGNRLRVF ARKPAPVQVT AWGHATGTGL PVMDYLLGDP VAIPVEDRHF
YAEAVYDLPS IVIIEPVPQQ WRSLELPFDR NGYLTYGSLN RISKISDAAI EVWSQVLAAS
PTSRLILKDH QIDDPAVRQT LLEKFGARGI ADGRITLLGS SSRQDHLETL KQIDLCLDPF
PQAGGVSTWE ALHMGVPVVS RLGHTVPSRV GCAVLAAAGL PDFIAPNDTR YIEIASKPDL
ERLRSIRRGL RDFILQRCGP AAYTRAVEEA YRTMWKRWCA APFDEAKDRA LRRGR
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