| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4427 |
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| Symbol | |
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| ID | 6412111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4755552 |
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| End bp | 4756736 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714309 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001993398 |
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| Protein GI | 192292793 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAACGA AGACGAAGGC CGCCCTCCGG GCCGCTTGCG CGTTTGGCGT GGTGGTAAGT
CTGGCCGGCT GCGGTGACGG TAAACAAGCG GGAGCCGACA AGCAGGCGCC GCCAGTCGTG
GTGAGCGTGG TTACTGTCGT GCCTGAAACG CTGCGCATCG TCAGCGACCT GCCCGGCCGC
ATCGCGCCGA CGCGGATCGC GGAAGTGCGG CCGCGGGTCT CCGGCATCAT CATCGAGCGG
GTGTTCCAAC AAGGTACCAT CGTCAAGCAA GGCGACGTGT TGTATCGGCT CGATCCGGCG
CCGTTCCAGG TTCGCGTTGC CAGCGCCAAG GCGACGCTGC AGCGTGCCGA GGCGACGCGC
ACGCTGGCGG CACAGCAAGC TGAGCGCCAG ACCCGGCTGA AGGATCGCGA CGTCACCACC
GTTCAACTCT ACGACAAGGC GGTTGCCGAA TTGGCGCAGG CCGAGGCGGA TGAGGCCTCC
GCACGCGCCG GCCTGCAGGC CGCAGAGCTC GATCTGCAAT ACACCGAAGT CCGCGCGCCG
ATCACCGGCC GCATCGGGCG GGCGCTGATC ACCGAAGGCG CGCTGTTCAC CGTCGGTGGC
AGCGAAAGCC TGGCGACCAT CCAGCAGCTC GACCCGGTTT ATGCCGACTT CACGCAGTCC
GCCAACGAGC TCTTGGCGTT GAAGCGGGCC GCGCAACAGT CGGCCAAAGC TGGAGATGCG
ATCGAAGCCG AAGTCCGCCT GCGTTTCGAT GATGGCGCGA GCTACGCGCA TCGCGGCCGG
CTGCTGTTCT CTGAAGCTTC AGTCGATGCC ACCACCGGGC AGGTCACACT GCGCGGTGAG
TTTCCCAATC CGGACGGCGA CCTGCTGCCC GGCATGTATG TCCGCGTGCA GCTGGTACAG
GGCGAGCAGG CCAACGCGCT GGCCGTGCCG GAGCGCGCGC TACGCCGCGA CCCGGGTGGG
CAGGCACAGC TCTACGTCAT CTCGGCCGAT CGCAAAGCCG AATTGCGGCC GGTGACGCCG
TCGCGGCTGG TCGACGGTCG CTGGATCATC GCCAGCGGTC TCCATTCCGG CGACGCGGTG
GTCGTCCAAG GCTTCCAGGC GCTGTCGCCG GGGGCGACGG TCGATCCGAA GCCATGGCCG
AACGCGGCGG CTGGCGCGAC CAGCGCCACC TCGCAGGCGA AGTGA
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| Protein sequence | MTTKTKAALR AACAFGVVVS LAGCGDGKQA GADKQAPPVV VSVVTVVPET LRIVSDLPGR
IAPTRIAEVR PRVSGIIIER VFQQGTIVKQ GDVLYRLDPA PFQVRVASAK ATLQRAEATR
TLAAQQAERQ TRLKDRDVTT VQLYDKAVAE LAQAEADEAS ARAGLQAAEL DLQYTEVRAP
ITGRIGRALI TEGALFTVGG SESLATIQQL DPVYADFTQS ANELLALKRA AQQSAKAGDA
IEAEVRLRFD DGASYAHRGR LLFSEASVDA TTGQVTLRGE FPNPDGDLLP GMYVRVQLVQ
GEQANALAVP ERALRRDPGG QAQLYVISAD RKAELRPVTP SRLVDGRWII ASGLHSGDAV
VVQGFQALSP GATVDPKPWP NAAAGATSAT SQAK
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