| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4372 |
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| Symbol | alaS |
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| ID | 6412056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4698982 |
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| End bp | 4701651 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714254 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001993343 |
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| Protein GI | 192292738 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCG TTAACGAAAT TCGGTCTACG TTTCTGAACT ACTTCGCCAA GAACGGCCAC
GAGATCGTGT CGTCGTCGCC GCTGGTGCCG CGCAACGACC CGACTTTGAT GTTCACCAAT
GCCGGCATGG TGCAGTTCAA GAACGTGTTC ACCGGGCTGG AGAAGCGCTC CTATCAGCGC
GCCACCACCT CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ACAACGACCT CGACAACGTC
GGCTACACCG CGCGGCATCT CACTTTCTTC GAGATGCTCG GCAACTTCTC GTTCGGCGAT
TACTTCAAGG AACGCGCGAT CGAGCTCGCC TGGAATCTGA TCACCCGCGA CTTCGGCCTG
AAGAAGGACA AGCTGCTGGT CACCGTCTAT CACACCGACG ACGAGGCGGC CGGCTACTGG
AAGAAGATCG CCGGCTTCTC CGACGACCGC ATCATCCGCA TTCCGACGTC CGACAACTTC
TGGGCGATGG GCGACACCGG CCCGTGCGGT CCGTGCTCCG AGATCTTCAT CGATCGCGGC
GAGCACATTT TCGGCGGACC GCCCGGCTCG CCGGACGAGG ACGGCGACCG CTTCCTGGAG
TTCTGGAATC TGGTGTTCAT GCAGTACGAC CAGGTGACGA AGGACGAACG CGTGCCGCTG
CCGCGTCCGT CGATCGACAC CGGCATGGGC CTGGAGCGGA TGGCCTCCAT CCTCCAGGGC
GTCGACAGCG TGTTTGACAC CGACCTGTTC CGCAGCCTGA TCGACGCGAC TTCGTCGGCG
CTTGGCCGTG GCCCGACCGA ACAGGACGCC GCCTCGTTCC GCGTCATCGC CGACCACCTG
CGCTCGTCGT CGTTCCTGAT CGCCGACGGC GTGCTGCCGT CGAATGAAGG CCGCGGCTAT
GTGCTGCGTC GGATCATGCG CCGCGCAATG CGCCACGCCC AGTTGCTCGG CGCCAGCGAG
CCGCTGATGT GGCGCCTGGT GTGGGCGCTG GTGCGCGAGA TGGGCCAGGC CTATCCGGAG
CTGGTGCGCG CCGAGGCGAT GATCGAAGAG ACGATGCGGC TCGAAGAGAC CCGCTTTCGC
AAGACGCTCG ATCGCGGCCT TGCGATCCTC GACGAGAAGA GCGCCGGCCT GAAGAAGGGC
GACATGTTCG ACGGCGAGAC CGCGTTCACG CTGTACGATA CCTATGGCTT CCCGCTCGAT
CTGACCCAGG ACGCGCTGCG CAACCGCGGC ATCAATGTCG ATATCGCCTC GTTCACCGAC
GCGATGGATC GGCAGCGCGC CAAGGCTCGC GCCTCGTGGG CGGGCTCGGG CGAAGCCGCG
ACCGAGGCGG TGTGGTTCTC GCTGCGTGAG AAGCTCGGCG CCACTGAGTT CCTCGGCTAC
GACACCGAGA CCGCCGAAGG CGTCGTCACC GCGCTGGTCA AGGACGGCGC TGAAGTTGAC
GCGCTGAAGG CCGGCGAGAG CGGTGCGATC ATCGTCAACC AGACGCCGTT CTACGCCGAG
TCCGGCGGTC AGGTCGGCGA CACCGGCGTG CTCACTGCCG ATGGCGTGCG CTTCGTCGTC
ACCGACACGA TGAAGAAGGC CGGTGATCTG TTCGTGCATT TCGGCACGGT CGAGCAGGGC
AGCATCAAGC TCGGCGACGC GTTGGCGCTC GACGTCGATC ACGCCCGGCG TTCGGCGATC
CGCGCCAATC ACTCGGCGAC ACATCTGCTG CACGAGGCGC TGCGCCAGGT GCTCGGCGAT
CACATTGCGC AGAAGGGCTC GCTGGTCGCG CCCGACCGTC TGCGCTTCGA CTTCGTGCAT
CAGAAGCCGA TCACTCAGGA CGAACTGCGC AAGGTCGAGG ACATCGCCAA CGACATCGTG
TTGGAAAACG ACGAGGTCGT GACCCGGCTG ATGGCGGTCG ACGATGCGCG CGAAGCCGGC
GCCCGCGCGC TGTTCGGCGA GAAGTACGGC GACGAAGTCC GTGTGGTCTC GATGGGCAAG
GCGGCGCGCG ATCACGGCTC CAACGTGTTC GGCTGGTCGG TCGAACTGTG CGGCGGCACC
CACGTCAAGC GCACTGGCGA CATCGGCCTA GTGTCGATCA CGGGTGAAAG CGCGGTCGCG
GCCGGCGTTC GTCGTATCGA GGCGCTGACC GGGCGCGCGG CACGGCACAA CGCCAATGCG
GCGATCAGCA CCGCGAAGCT CGCTGCCTCC GAACTGCGGA CCACGCTGGA CGACATGCCG
GCGCGGATCA CCGCGCTGAT GGACGAGCGC AAGAAGCTCG AGCGTGAACT GTCCGAGGCG
CGCAAGAAGC TGGCGATGGG CGGCAGTGCG TCCGGTGACG GCGCCGCATC CGACGTCCGC
GACATCGGTG GCATCAAGCT GATGGCGCGT GCGGTCGAAG GCATCGAGAT CAAGGATCTC
AAGGGCCTGG TCGACCAGGG CAAGAAGCAG CTCGGCTCCG GCGTGATCGC GCTGGTGGCG
ACCAGCGAAG ACGGCAAGGG CTCGATCGTG GTCGGCGTCA CGCCCGACCT GGTGTCGCGG
TTCTCCGCCG TCGATCTGGT CCGCAAGGCG TCCGAAGTGC TCGGCGGCAA GGGCGGCGGC
GGCAAGCCCG ACATGGCGCA GGCCGGCGGT CCCGACGGCT CCAAGGCCGG CGCCGCGCTG
GAAGCGATCG CGGCAGCCAT CGGCGGCTGA
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| Protein sequence | MSGVNEIRST FLNYFAKNGH EIVSSSPLVP RNDPTLMFTN AGMVQFKNVF TGLEKRSYQR
ATTSQKCVRA GGKHNDLDNV GYTARHLTFF EMLGNFSFGD YFKERAIELA WNLITRDFGL
KKDKLLVTVY HTDDEAAGYW KKIAGFSDDR IIRIPTSDNF WAMGDTGPCG PCSEIFIDRG
EHIFGGPPGS PDEDGDRFLE FWNLVFMQYD QVTKDERVPL PRPSIDTGMG LERMASILQG
VDSVFDTDLF RSLIDATSSA LGRGPTEQDA ASFRVIADHL RSSSFLIADG VLPSNEGRGY
VLRRIMRRAM RHAQLLGASE PLMWRLVWAL VREMGQAYPE LVRAEAMIEE TMRLEETRFR
KTLDRGLAIL DEKSAGLKKG DMFDGETAFT LYDTYGFPLD LTQDALRNRG INVDIASFTD
AMDRQRAKAR ASWAGSGEAA TEAVWFSLRE KLGATEFLGY DTETAEGVVT ALVKDGAEVD
ALKAGESGAI IVNQTPFYAE SGGQVGDTGV LTADGVRFVV TDTMKKAGDL FVHFGTVEQG
SIKLGDALAL DVDHARRSAI RANHSATHLL HEALRQVLGD HIAQKGSLVA PDRLRFDFVH
QKPITQDELR KVEDIANDIV LENDEVVTRL MAVDDAREAG ARALFGEKYG DEVRVVSMGK
AARDHGSNVF GWSVELCGGT HVKRTGDIGL VSITGESAVA AGVRRIEALT GRAARHNANA
AISTAKLAAS ELRTTLDDMP ARITALMDER KKLERELSEA RKKLAMGGSA SGDGAASDVR
DIGGIKLMAR AVEGIEIKDL KGLVDQGKKQ LGSGVIALVA TSEDGKGSIV VGVTPDLVSR
FSAVDLVRKA SEVLGGKGGG GKPDMAQAGG PDGSKAGAAL EAIAAAIGG
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