| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4365 |
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| Symbol | |
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| ID | 6412049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4688240 |
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| End bp | 4690549 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714247 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001993336 |
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| Protein GI | 192292731 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.145999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC AGCCGCGTTC TGCCGAACTA ATTGCTTCAC GACAGCAAGC GCTGCGGCGC
AGCCGCAAAT ACGCCGCGTC GCTGCCGATG AGTGCATTGC TGCTGATCGG TGCGGTGGCC
GACGATGCGC GGGCTCAGGC TGCGGGAACT GCGCCCACCT CACCGGCCGT GAGCGCGCTG
CCTGCCGTGG TCGTCAGTGC CCCGAAGCAG AGCAAGCCGA AACGGAGGGC TACACCGCCG
ACCGTAACCG CCGCCCCCGC AGCGCTCCCG CGCCCGACCT CGCGGACGAC AACCGCACGC
GACGCCGACG GGCCGGGTTT CGTCGCCCGG ACCAGCACGA CAGGAACCAA GACCAATACG
CCGCTGATCG AAACGCCGCA GTCGATCTCG GTGATCAACC GCCAGCAGAT GGACGCGCAG
AACGTGCAGT CGGTGACCGA CGCCTTGCGC TACTCGGCCG GCGTTGTCAC GACGACACCG
GCGATCTCGC AGCGCTTCGA CACGTTCAGC ATTCGCGGCT TCGATGCGAG CAGCAGCGGA
ATCCTGCGCG ACGGCCTGCG CGGCACCACC GCCCAAGCCT GGCCGAAGAG CGAGCCTTAT
GGTCTCGAAC GCGTCGAGGT GTTGCGCGGG CCAAGCTCGG TGCTGTACGG CCAGAACGCA
CCGGGCGGCC TGGTCAACCT CATCACCAAG CGACCGCTCG ACAAGCCTTT CCACGAAGTG
ATGCTGCAGG GCGGCAGCTT CGACCGGCTG CAAGGGCAGT TCGATCTCAG CGGTCCGGTC
GACAAGGACG GCCAGTTTCT CTACCGGCTG ACCGGACTGG CGCGCGACAG CAATACGCAA
TTCAAGGCGA TCCCGGACGA CAAGGTGTTC ATCGCGCCGG CGTTCACCTG GCGGCCGGAT
ATCGACACCA CGCTGACCAT CCTGACCGAC TACAGCCACG AGAAGTTCGG GCCGCCGCGC
CCGTACATTC CGATCCAGGG CACGCTGCTT CCGAACAAGA ACGGGCAATT GCCGCGCAAC
CAGTTCCTCG ACCAGCCCGG GCTCGACAAC GATCGCACGC AATATTCGGC CGGCTATCTG
TTCGAGCGCC ATCTCGACGA CACCTTCACG ATGCGGTCGA ATTTCCGCTA CGGCCACGTC
GACCTTTTGA CCAACACCGC GTCAGGCATG AGTCTTGCGG CCGACCAGCG GACACTCAAT
CGCGCGCTGT ATCAATTCCG CATCGTCGGC GACACCTACG CGTCCGACAA TCAGATCCAG
GCCGACTGGT GGATGGGCTC GACGCAGTTC GTGTCGCTGG CCGGCGTCGA CTATCGCCGT
TCGACCGAGG ACTACTACCT CAACAGCGGC CGCGCTCCAT CGATCGACAT CTTCAATCCA
GTCTACAACC AGCCGATCGG TGCAGCGACC ACGGCGAGCG CCTCGACCTG GCAGACCTCC
GACCAGATCG GCATCTATGG CCAGCAGCAG ATCAAGTTCG ACGGACGTTG GGTACTGAGC
CTCGGCGGCC GCCAGGACTG GTCGAACACC GCCACGGATA ACCGCCTGAA ACGCTCGACC
GCGACGCAGG ACGACAAGGC GTTCACCTAC CGGGCTGGGC TCGTCTATCT CAGCGACGTC
GGCCTCGCGC CCTATATCGG CTACTCGACC TCGTTCAGCC CGGTGCTCGG GACCGACTTC
TACGGCCAGC CCTACAAGCC GACCACCGGA CGGCAAGCGG AGATCGGCAT CAAGTACCAG
CCGGCCGGGG CAACCAGCTT CGTCACCATG TCGGTGTTCG ATCTCTATCA GGAGAACGTG
CAGACCACCG ATCCGAACAA TTCGCTCAAC CGTCTTCAAG TCGGCGAGGT GCGTTCCCGC
GGGTTTGAGC TTCAGGGCGT CGCCAATCCG ATCGCAGGCC TGAATCTCGT GGCCTCATAC
ACCCACGCAG AACTGACCGT GACCAAGAGC AACATCGCAG CCGAGCTCGG CAACCGTCCG
ACCGGGCTGC CTGCGGACAC CGCGTCGCTG TGGGGCGACT ACACGTTCCA GAGCGGCCCG
CTGGCCGGCT TCGGCGCCGG CGTCGGCACG CGCTATGTGG GCGAGAGCTT CGCGGATTCC
GCCAACACCA TCGGCGTGCC GTCCTATGTG CTGTTCGACG CCGCACTGCA CTACGATCTC
GGCCAGCTTC ATCGCGATCT CAAGGGGATG CGGCTCGCCA TCAACGCCAC CAACCTCACC
AACAAGCAGT ACTACGTGAG CTGCTCGGCC ACGAGTTGCA ACGCCGGCTT CGACCGCTCG
GTCATCGCCA GCCTTCGCTA CCGGTGGTGA
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| Protein sequence | MTTQPRSAEL IASRQQALRR SRKYAASLPM SALLLIGAVA DDARAQAAGT APTSPAVSAL
PAVVVSAPKQ SKPKRRATPP TVTAAPAALP RPTSRTTTAR DADGPGFVAR TSTTGTKTNT
PLIETPQSIS VINRQQMDAQ NVQSVTDALR YSAGVVTTTP AISQRFDTFS IRGFDASSSG
ILRDGLRGTT AQAWPKSEPY GLERVEVLRG PSSVLYGQNA PGGLVNLITK RPLDKPFHEV
MLQGGSFDRL QGQFDLSGPV DKDGQFLYRL TGLARDSNTQ FKAIPDDKVF IAPAFTWRPD
IDTTLTILTD YSHEKFGPPR PYIPIQGTLL PNKNGQLPRN QFLDQPGLDN DRTQYSAGYL
FERHLDDTFT MRSNFRYGHV DLLTNTASGM SLAADQRTLN RALYQFRIVG DTYASDNQIQ
ADWWMGSTQF VSLAGVDYRR STEDYYLNSG RAPSIDIFNP VYNQPIGAAT TASASTWQTS
DQIGIYGQQQ IKFDGRWVLS LGGRQDWSNT ATDNRLKRST ATQDDKAFTY RAGLVYLSDV
GLAPYIGYST SFSPVLGTDF YGQPYKPTTG RQAEIGIKYQ PAGATSFVTM SVFDLYQENV
QTTDPNNSLN RLQVGEVRSR GFELQGVANP IAGLNLVASY THAELTVTKS NIAAELGNRP
TGLPADTASL WGDYTFQSGP LAGFGAGVGT RYVGESFADS ANTIGVPSYV LFDAALHYDL
GQLHRDLKGM RLAINATNLT NKQYYVSCSA TSCNAGFDRS VIASLRYRW
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