Gene Rpal_4352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4352 
Symbol 
ID6412036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4676968 
End bp4677786 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content70% 
IMG OID642714234 
Producthypothetical protein 
Protein accessionYP_001993323 
Protein GI192292718 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.174132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTA CCGCGGCCAA GCGGACCACG TTTCGCAAAC TGCACGAGAC CGGCTGCTTC 
GTGCTGCCGA ATCCGTGGGA TGTCGGCTCG GCGCGAGCGC TGGCGTCGCT CGGGTTTCAG
GCGCTGGCCT CGACCAGCGC CGGCTTTGCG TGGTCGGCGG GGCGGGCGGA CAATCAGGTG
GGCTGCGACG ACGTGCCGGC GCATCTGACC ACGCTGTGCG CGGCGGTGGA TCTGCCGATC
AATGCCGATT TCGAGAACGG CTTTGCCGAC AGTCCGGAGG GCGTCGCCGC CAACGTGACG
CGCGCGATCT TCACCGGCAT CGCCGGGCTG TCGATCGAGA ATACGACCTC CGATCCGGCG
CAGCCGTTCT ACGACGATGC GCTCGCCGCC GAGCGGATCA AGGCGGCGCG GGCGGCGATC
GACGCGTCGG GTGAGGACGT GGTGCTGGTG GCGCGCTGCG AGGGCTTCTT CAAGGGCGAG
CGCGATCTCG CCAAGACCAC CGCGCGGCTG GTGGCGTTCG CCGAGGCCGG CGCCGATTGC
CTGTACGCGC CGGGCGTCAC CACCGAGGCC GAGATCACCA CGCTGGTGAA GGCGGTGGCG
CCGAAGCCGC TCAACGTGCT GATCGCGCAG CCGAGCATGA CGGTGCCGAT GCTCGCCGAC
CTCGGCGTCC GCCGCATCAG CGTCGGCGGC TCGCTGGCGC GCTGCGCCTG GGCCGGCTTC
CTCGGCGCCG CGCGCGAGAT CGCCGAGCAG GGCACGTTCA CGGCATTCGC CGGAGCGACG
AAGGGCGCGG AGCTGAACGG GCTGTTTGGG GGGAAGTAA
 
Protein sequence
MITTAAKRTT FRKLHETGCF VLPNPWDVGS ARALASLGFQ ALASTSAGFA WSAGRADNQV 
GCDDVPAHLT TLCAAVDLPI NADFENGFAD SPEGVAANVT RAIFTGIAGL SIENTTSDPA
QPFYDDALAA ERIKAARAAI DASGEDVVLV ARCEGFFKGE RDLAKTTARL VAFAEAGADC
LYAPGVTTEA EITTLVKAVA PKPLNVLIAQ PSMTVPMLAD LGVRRISVGG SLARCAWAGF
LGAAREIAEQ GTFTAFAGAT KGAELNGLFG GK