Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4352 |
Symbol | |
ID | 6412036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4676968 |
End bp | 4677786 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642714234 |
Product | hypothetical protein |
Protein accession | YP_001993323 |
Protein GI | 192292718 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.174132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTA CCGCGGCCAA GCGGACCACG TTTCGCAAAC TGCACGAGAC CGGCTGCTTC GTGCTGCCGA ATCCGTGGGA TGTCGGCTCG GCGCGAGCGC TGGCGTCGCT CGGGTTTCAG GCGCTGGCCT CGACCAGCGC CGGCTTTGCG TGGTCGGCGG GGCGGGCGGA CAATCAGGTG GGCTGCGACG ACGTGCCGGC GCATCTGACC ACGCTGTGCG CGGCGGTGGA TCTGCCGATC AATGCCGATT TCGAGAACGG CTTTGCCGAC AGTCCGGAGG GCGTCGCCGC CAACGTGACG CGCGCGATCT TCACCGGCAT CGCCGGGCTG TCGATCGAGA ATACGACCTC CGATCCGGCG CAGCCGTTCT ACGACGATGC GCTCGCCGCC GAGCGGATCA AGGCGGCGCG GGCGGCGATC GACGCGTCGG GTGAGGACGT GGTGCTGGTG GCGCGCTGCG AGGGCTTCTT CAAGGGCGAG CGCGATCTCG CCAAGACCAC CGCGCGGCTG GTGGCGTTCG CCGAGGCCGG CGCCGATTGC CTGTACGCGC CGGGCGTCAC CACCGAGGCC GAGATCACCA CGCTGGTGAA GGCGGTGGCG CCGAAGCCGC TCAACGTGCT GATCGCGCAG CCGAGCATGA CGGTGCCGAT GCTCGCCGAC CTCGGCGTCC GCCGCATCAG CGTCGGCGGC TCGCTGGCGC GCTGCGCCTG GGCCGGCTTC CTCGGCGCCG CGCGCGAGAT CGCCGAGCAG GGCACGTTCA CGGCATTCGC CGGAGCGACG AAGGGCGCGG AGCTGAACGG GCTGTTTGGG GGGAAGTAA
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Protein sequence | MITTAAKRTT FRKLHETGCF VLPNPWDVGS ARALASLGFQ ALASTSAGFA WSAGRADNQV GCDDVPAHLT TLCAAVDLPI NADFENGFAD SPEGVAANVT RAIFTGIAGL SIENTTSDPA QPFYDDALAA ERIKAARAAI DASGEDVVLV ARCEGFFKGE RDLAKTTARL VAFAEAGADC LYAPGVTTEA EITTLVKAVA PKPLNVLIAQ PSMTVPMLAD LGVRRISVGG SLARCAWAGF LGAAREIAEQ GTFTAFAGAT KGAELNGLFG GK
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