| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4321 |
|---|
| Symbol | |
|---|
| ID | 6412005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4649515 |
|---|
| End bp | 4650216 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642714203 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001993292 |
|---|
| Protein GI | 192292687 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTCG AGATCCTGCA GCAACTCAAC GCCGAGCGCG CCGCGCGGCG CCCGGCTATC
GTGGTGACTG ATACGGCGAC CGGGGGGCAG CGGCTGGTGA AAGCCGCCGA CATCGCTGCT
GATCCACTGG CTGCGGAGCT TGGTAAGCAG CTCCGCATGG GCAAGAGCGC GAGCATCGAG
ATCGACGGGC GGAAGCTGTT TCTCAACGTC TATGCGCCGA CCGCGAAGCT GGTGATCGTC
GGCGCGGTGC ATATCAGTCA GGCGCTGGCG CCGTTGGCGC GCTCGCTCGG CTACGACGTC
ACCGTGGTCG ATCCGCGCAC CGCATTTGCC AGCCCGGAGC GTTTCCCCGA CGTGCCGCTG
ATCGCCGAGT GGCCCGACGT CGCGCTGCCG CCGCTGAACA TCGATCACTA CACCGCCTTC
GTGGCGCTGA CGCACGATCC GAAGATCGAC GATCCGGCGC TACTGCATGC GTTCGCGCGC
GACTGTTTCT ACATCGGCGC GCTCGGCTCG AAGAAGACCC ACGCGAAACG GCTGGAGCGG
CTGAAGGGGC AGGGCGCCTC CGATGCCGAC CTCGGCCGCA TTCATGCGCC GATCGGGCTG
GCGATCGGGG CAGTGTCGCC GTCCGAGATC GCGGTGTCGA TCATGGCGGA GATTACCGCA
GCGCTGCGGC TGCCGGCATC GTCCAAGGCG GCTGCGGCAT GA
|
|---|
| Protein sequence | MKFEILQQLN AERAARRPAI VVTDTATGGQ RLVKAADIAA DPLAAELGKQ LRMGKSASIE
IDGRKLFLNV YAPTAKLVIV GAVHISQALA PLARSLGYDV TVVDPRTAFA SPERFPDVPL
IAEWPDVALP PLNIDHYTAF VALTHDPKID DPALLHAFAR DCFYIGALGS KKTHAKRLER
LKGQGASDAD LGRIHAPIGL AIGAVSPSEI AVSIMAEITA ALRLPASSKA AAA
|
|---|
| |