| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4279 |
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| Symbol | |
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| ID | 6411963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4606596 |
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| End bp | 4607402 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714161 |
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| Product | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
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| Protein accession | YP_001993250 |
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| Protein GI | 192292645 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | [TIGR02312] 2-oxo-hepta-3-ene-1,7-dioic acid hydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00917502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTGT CGAACAACGA AATTCGCGCC GCGGCCGAGC GGCTGCAGCA GGCCGAGACA
ACCAAGGTGC AGATCCGCCA GCTGTCGCTG GATCATCCGG CAATCACGAT CGCCGACGCC
TACGCAATCC AGGGCGCCTG GATCGAGATC AAGCAGGCTG CGGGCCGGCG CGTGCGCGGC
CACAAGATCG GGCTGACCTC GAAGGCGATG CAGAGCCAGC TCGGCATCGA TGAGCCGGAC
AGCGGCATTC TGCTCGATGA CATGTTCTTT GGTGACGGCG GCATCGTGCC GACCGATCGC
TTCATCGCGA CGCGGATCGA AGCCGAGCTT GCCTTCGTCA TCAAGCATCG CCTCGCCGGC
CCGCATTGCA CGATCTTCGA CGTGCTGAAC GCGACGGATT TCGTGGTGCC GGCGCTGGAG
ATCCTCGATA CACGCGTGCA GCGCGTCGAC CCGGAGACCA AGGCGACGCG GAAAATCGTC
GACACCATCG CCGATAACGC GGCGAATGCC GGCATCGTGC TCGGCGGCCG GCCAATCCGG
CCGCTCGACA CCGACCTACG CTGGATCGGC GCGCTCGCTT ACAAGAACGG TCAGCTCGAG
GAGACCGGCC TCGCCGCAGG CGTGCTCAAC CATCCGGCGA CCGCGGTGGC GTGGCTGGCC
AACAAAATCG CGCCGCAGGG CCTGACGCTG GAGCCAGGCC AGATCGTGCT GGCCGGCTCG
TTCATTCGCG CGATCGAGAC CGCGAAGGGT GATACGATCC AGGCCGACTA CGGTCCTTAC
GGCACCGTGA GTTGTTACTT CGGGTGA
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| Protein sequence | MALSNNEIRA AAERLQQAET TKVQIRQLSL DHPAITIADA YAIQGAWIEI KQAAGRRVRG
HKIGLTSKAM QSQLGIDEPD SGILLDDMFF GDGGIVPTDR FIATRIEAEL AFVIKHRLAG
PHCTIFDVLN ATDFVVPALE ILDTRVQRVD PETKATRKIV DTIADNAANA GIVLGGRPIR
PLDTDLRWIG ALAYKNGQLE ETGLAAGVLN HPATAVAWLA NKIAPQGLTL EPGQIVLAGS
FIRAIETAKG DTIQADYGPY GTVSCYFG
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