| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4278 |
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| Symbol | |
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| ID | 6411962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4605811 |
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| End bp | 4606350 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714160 |
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| Product | transcriptional regulator, MarR family |
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| Protein accession | YP_001993249 |
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| Protein GI | 192292644 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00638818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGAGT TCTCGCGCTC GCTGCCGATG CTGCTGCTGC GTGGCCGCGA GGCGGTGATG
CGGCACTTCC GCCCGCTGCT GCGCGCCCAC GGTCTCAGCG AGCAGCAATG GCGCATCCTG
CGTGCGCTTA CGGCGGTCGA TGCGCTCGAA GTCACCGAGC TGGCGCACAG CGCCTTCCTG
CTCGGCCCCA GTCTGTCGCG GATGCTGCGT GATCTCGAGG CCCGCAAGCT GGTGGCGCGC
AAACTCGCCA AGGACGACCA GCGTCGTAGC ATGGTGTCGA TCACCCCCAA GGGGCTGAAG
CTGATCGAGA CGGTCGCGCC GTTCTCGGAA GCAATCTACG CCGAGATCAC GCGGCGGACC
GGCGGTGCCA GGCTCGCCGA ATTGCAGGAG CTGCTGCGCG CGTTGGAGGC GAGCCTGATG
GCGATGCCGG TGCGCCATGC CGGAAGCGTG GTGGACAGCG ATCAGGAATC TCGCTCAACT
CGCGGCCGCA ATGTTCGACC GCAGGCGAAG GCCGCGGTGC CGGGAGGAGA CGACGAATGA
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| Protein sequence | MREFSRSLPM LLLRGREAVM RHFRPLLRAH GLSEQQWRIL RALTAVDALE VTELAHSAFL
LGPSLSRMLR DLEARKLVAR KLAKDDQRRS MVSITPKGLK LIETVAPFSE AIYAEITRRT
GGARLAELQE LLRALEASLM AMPVRHAGSV VDSDQESRST RGRNVRPQAK AAVPGGDDE
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