| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4245 |
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| Symbol | |
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| ID | 6411929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4559205 |
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| End bp | 4560437 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642714127 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_001993216 |
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| Protein GI | 192292611 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCT TCCGTTCGGG CGCGCTCGCT GTTTCGACAG CGGTCGCCGT TTTCGCCGCG
TTTAGCGGCA CCGCTTTCGC CCAGAAGAAA TACGACACCG GCGTCACCGA CACCGAGATC
AAGATCGGCA ACATCATCCC CTATTCGGGC CCGGCATCGG CCTACGGCAC CATCGGCAAG
ACCGAGGAAG CCTATTTCCG GATGGTCAAC GAACGGGGCG GCATCAACGG CCGCAAGATC
AACTTCATCA GCTATGACGA CGCCTACTCG CCACCGAAGG CGGTCGAGCA AGTGCGCAAG
CTGGTCGAGG GCGATGAAGT GCTTGCGGTG TTCAACCCGC TCGGCACGCC GTCCAATACA
GCGATCCAGA AGTATCTCAA CGCCAAGAAG GTGCCGCAGC TGTTCGTCGC CACCGGCGCC
AGCAAGTGGA ACGATCCGAA GGCGTTCCCG TGGACGATCG GCTGGCAGCC GTCGTACCAG
AGCGAGGCGC AGATCTACGT CAAATACATC ATAAAAGAGA AGCCGAACGC CAAGGTGGCG
ATCCTTTATC AGAACGACGA CTTCGGCAAA GACTACCTGA AGGGTACCAA GGACGGCTTC
GGCGAGAAAG GCGCCTCGAT GATCATCGCC GAGGAAGCCT ATGAAATCTC CGAACCGACC
ATCGACAGCC ACATCGTCAA GCTGAAGTCG CTCAATCCCG ACGTACTGCT GATCTACACC
ACGCCGAAGT TCGGCGCGCA GACCATTCGC AAGACCGCCG AGATCGGCTG GAAGCCGTTG
CAGATCCTCA CCAACGTGTC GGCCTCGGTC GGCAGCGTGA TGCAGCCCGC CGGCTTCGAC
AACGCCCAGG GCGTGTTGTC GGCCAACTAC GCCAAGGATC CGACCGACCC GCAGTGGGAC
AACGATCCGA GGTTCAAGAA GTGGCACGCC TTCGTCGACA AATACATGCC GGGCGCCAAC
AAGGCCGACG GCAATCTGGT TTACGGCTAC GGCGCCGCCC AGACGCTGCA CAAGGTGCTG
GAAATGTGCG GCGATAACCT GACCCGCGAA AACCTGATGA AGCAGGCCGC CAGCCTGAAG
GACTTCGAGC CGGACACCCT GCTACCGGGC GTCAAGATCA ACACCTCGCC GACCGATTTC
GCCCCGATCA GCCAGCTGCA GATGATGCGG TTCAAGGGCG ACAAGTGGGA ACTGTTCGGC
GACATCATCT CGGCGGACGC GCCGACGAAC TGA
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| Protein sequence | MPTFRSGALA VSTAVAVFAA FSGTAFAQKK YDTGVTDTEI KIGNIIPYSG PASAYGTIGK
TEEAYFRMVN ERGGINGRKI NFISYDDAYS PPKAVEQVRK LVEGDEVLAV FNPLGTPSNT
AIQKYLNAKK VPQLFVATGA SKWNDPKAFP WTIGWQPSYQ SEAQIYVKYI IKEKPNAKVA
ILYQNDDFGK DYLKGTKDGF GEKGASMIIA EEAYEISEPT IDSHIVKLKS LNPDVLLIYT
TPKFGAQTIR KTAEIGWKPL QILTNVSASV GSVMQPAGFD NAQGVLSANY AKDPTDPQWD
NDPRFKKWHA FVDKYMPGAN KADGNLVYGY GAAQTLHKVL EMCGDNLTRE NLMKQAASLK
DFEPDTLLPG VKINTSPTDF APISQLQMMR FKGDKWELFG DIISADAPTN
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