| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4194 |
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| Symbol | |
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| ID | 6411878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4498375 |
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| End bp | 4498587 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714076 |
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| Product | cold-shock DNA-binding domain protein |
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| Protein accession | YP_001993165 |
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| Protein GI | 192292560 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.69443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGCATGG GAACCGTGAA GTGGTTCAAC GCGACCAAGG GCTACGGCTT CATCCAGCCG
GATGATGGCG GCAACGACGT GTTCGTGCAC ATCAGCGCTG TCGAGCGTGC CGGTCTCGGC
ACCCTGCGCG AGGGCCAGAA GATCAGCTAC GAAATCGTCG CCGATCGCCG CTCTGGCAAG
TCGTCGGCCG ACAATCTGCG CGCTGCAAGC TGA
|
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| Protein sequence | MSMGTVKWFN ATKGYGFIQP DDGGNDVFVH ISAVERAGLG TLREGQKISY EIVADRRSGK
SSADNLRAAS
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