| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4126 |
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| Symbol | |
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| ID | 6411810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4421123 |
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| End bp | 4421893 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714008 |
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| Product | trans-aconitate 2-methyltransferase |
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| Protein accession | YP_001993097 |
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| Protein GI | 192292492 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4106] Trans-aconitate methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.613741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACT GGAATGCCGA GCAATATCTG AAATTCGAAG ATGAGCGGAC CCGCCCGGCG
CGGGATCTGC TGGCGCAGGT GCCGACCACG GCGCCGCGCA AGGTCGCCGA CATCGGCTGC
GGGCCGGGCA ATTCCACCGC GCTCCTGGTC GAGCGTTGGC CCGAGGCTTC GGTGATCGGC
GTCGATACCT CCGCCGACAT GCTGCGCCAA GCCCGCGAGC GGCTGCCGCA GCACAAGTTC
ATCGAGGCCA ATGTCGCGCA TTGGGCGCCG CCGGCTGGGA CCGACGTGCT GTTCGCCAAT
GCGGTGTTCC AATGGGTCCC GGACCATCTC AAGCAGCTCA GACGCCTGCT GTCGGGGCTG
GACAGCGGCG GCGTGCTCGC GGTGCAGATG CCGGACAATC TCGACGAGCC GTCGCACATC
ATGATGCGCG AGGTCGCGCT GCAGGAGCCG TGGCGGCATC AGCTGTCCAA GGCCGCCGAG
CTGCGCGACA CGCTGCCGAA GCCGAGCGTG TATTACGATG CGCTGAAGCC TTTGTGCAGC
CGGCTGGAGA TCTGGCACAC GGTCTACAAC CACGCGCTCG ACGGCCCCGA AGCGATCGTC
GAATGGGTCA AGGGCACGGG GTTGCGGCCG TTTATCGATC CGCTCGAACT ACCGGAACGT
AAAACCTATC TGGCTGCCTA TACGGCGCGG ATCGCAGCAG CGTATCCCGC ACAGGCCGAC
GGCCAGGTGC TGCTGCGGTT TCCGCGGATC TTCATCGTGG CGGTGAAGTA A
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| Protein sequence | MADWNAEQYL KFEDERTRPA RDLLAQVPTT APRKVADIGC GPGNSTALLV ERWPEASVIG
VDTSADMLRQ ARERLPQHKF IEANVAHWAP PAGTDVLFAN AVFQWVPDHL KQLRRLLSGL
DSGGVLAVQM PDNLDEPSHI MMREVALQEP WRHQLSKAAE LRDTLPKPSV YYDALKPLCS
RLEIWHTVYN HALDGPEAIV EWVKGTGLRP FIDPLELPER KTYLAAYTAR IAAAYPAQAD
GQVLLRFPRI FIVAVK
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