| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4092 |
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| Symbol | |
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| ID | 6411776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4391200 |
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| End bp | 4392306 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713974 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001993063 |
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| Protein GI | 192292458 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0346042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCAGA CAGTTGAAGG CCGTGGCGGG GCCGAATCCG CCGATCTTTC CGCGTTGGCT
TCAGTTTCTT CCGCGCTGAC AGCTGCTGCT CTGCGCAGCG CGAAGCCGGA CCTGCGCAAG
GACGCGCCGG TGTCGGTGAT CGGTGCCGGC ATCGCCGGTG CCTGGCAGGC GCTGCTGCTG
GCGCGCGCCG GCCGCAAGGT CAATCTGTAC GAACGCGGCG ACAACGAGAT GACACAGGCC
ACCAGCCATT GGGCGGGCGG CATGCTGGCG CCGTATTGCG AGGCCGAGGG CGCCGAGCCG
ATGGTCAGCC AGATCGGCAT GCGCTCGCTG GAGATGTGGC GCAAGGAATT CCCGGAAGCG
GTGTTCAACG GCTCGCTGGT GGTGGCGCAT CCGCGCGACC GCGCCGATTT CGAGCGCTTC
GCCAAGATGA CCACCGGCCA TCAGCGCGTC GACGCCGACG GCATCGCCGA GCTGGAGCCG
GCGCTCGCCG GCCGGTTCCG CGAGGGTCTG TTTTTCCCGG ACGAAGGCCA TGTCGAGCCG
CGGCTGGTGC TGGCGCGCCT GCACGAGCGG CTGATCGAGG CCGGCGGCGC CATCCATTTC
GAATCGGAAA TGACGCCGGA AGATCTCGAC GGCCTGGTGA TTGACTGCCG GGGCCTCGCT
GCCCGCGACA AGGCGCCGGA GCTGCGCGGC GTCAAGGGCG AGATGGTGGT GATCAAGACC
GCCGAGGTGC AGCTGTCGCG CCCGGTGCGG CTGATGCACC CGCGCTGGCC GCTCTACGTC
ATCCCGCGCC AGAACAATCA CTTCATGCTC GGCGCCACCA CCGTCGAGAG CGAAGACGAG
CTGGTGATGG TGCGCTCGGC ACTGGAACTG CTCAGCGCCG CTTACGCGGT GCATCCGGCG
TTCGGCGAAG CCCATATCGT CGAACTCGGC GCCGGGCTGC GTCCCGCCTT CCCCGACAAC
CTGCCGCGGA TCGCCATCGG CAACCGCCGC GTCGCCACCA ACGGCCTGTA TCGCCACGGC
TTCCTGATGG CGCCGTCGCT GGCCGAGAAG GTGGTGGCGT ACGTCGAGCG CGGCGAGATC
GACAATCAGG TGATGCGATG CTTGTGA
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| Protein sequence | MHQTVEGRGG AESADLSALA SVSSALTAAA LRSAKPDLRK DAPVSVIGAG IAGAWQALLL
ARAGRKVNLY ERGDNEMTQA TSHWAGGMLA PYCEAEGAEP MVSQIGMRSL EMWRKEFPEA
VFNGSLVVAH PRDRADFERF AKMTTGHQRV DADGIAELEP ALAGRFREGL FFPDEGHVEP
RLVLARLHER LIEAGGAIHF ESEMTPEDLD GLVIDCRGLA ARDKAPELRG VKGEMVVIKT
AEVQLSRPVR LMHPRWPLYV IPRQNNHFML GATTVESEDE LVMVRSALEL LSAAYAVHPA
FGEAHIVELG AGLRPAFPDN LPRIAIGNRR VATNGLYRHG FLMAPSLAEK VVAYVERGEI
DNQVMRCL
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