Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3892 |
Symbol | |
ID | 6411572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4179175 |
End bp | 4180206 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642713774 |
Product | Patatin |
Protein accession | YP_001992865 |
Protein GI | 192292260 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGAAA ATCTGATCGG ACGCGGGCAA GCGCACCCGC CGGCAGCGGA CAAGGTCGGC CTCGACACCA TTCGCCGGCC GGTGATCGGC TTGGCGCTCG GCGGCGGCGC GGCGCGCGGC TTTGCGCATA TCGGTATCCT GCGCACCCTG CTGGCGCACG GCATTACGCC CGACGTGGTG GTCGGCACCT CGATCGGCGC CGTGGTCGGC GGAGCCTATG TGTCCGGTCA TCTCGACACG CTGGAGGAGT GGGCGCGGCG ACTGCAGCCC CGCAACATCT TCGGCTATCT GGATATTCGG CTCAATGGTT CCGGCCTGAT CGGCGGCAGC AAACTCGCCG CGCAGCTCGA CGCCACGCTC GGCCAGATCC TGATCCAGGA TCTCACCCAA AAGTTCGCCA GCGTCGCCAC CGAGGTGGCC ACCGGTCACG AGATCTGGCT GACCCACGGA CGGATCGTCG ACGCGGTCCG CGCCTCCTAC GCCCTGCCCG GCATCTTCTC GCCGGTGCTG ATCGGCGACC GCTGGCTGGT CGACGGTGCG CTGGTCAATC CGGTGCCGGT GTCGGCCGCG CGGGCGCTCG GCGCCGAGAT CGTGATCGCC GCCAACGTCT CCAGCGACGT GTTCGGCCAC GGCACCACGA TCTTCTCGCA TGGCAGCGCC GCTGCGGCGG CAATGGAACC CGAAGCCGAG GAACCGCCGG CGCAGAAGCG CGGCTTCACG CGGTTCTTCT CGCCTGAGAG ATTCGTCAAA CAGGAGCTGT TCGGCAGCCC GGAGCGCCCC GGCATCTCCA AGGTGATGAC CGATGCCTTC AATATCATGC AGGACCGCAT CACCCGGGCG CGGCTCGCCG GCGATCCCCC GGACCTGCTG ATTTCGCCGC GGGTCGGCCG GATCGGCTGG TTCGACTTCC ACCGCGCCGA CGAGATCATC GCCCACGGCG CCCGCGCCGC GGAGCGCGCG ATCGACTCGA TCCGCGAAGC GATCGAAGAA GTCGCGCCGC AGCCAAAGGC CACGGTTCCG GTCGAGACCT GA
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Protein sequence | MLENLIGRGQ AHPPAADKVG LDTIRRPVIG LALGGGAARG FAHIGILRTL LAHGITPDVV VGTSIGAVVG GAYVSGHLDT LEEWARRLQP RNIFGYLDIR LNGSGLIGGS KLAAQLDATL GQILIQDLTQ KFASVATEVA TGHEIWLTHG RIVDAVRASY ALPGIFSPVL IGDRWLVDGA LVNPVPVSAA RALGAEIVIA ANVSSDVFGH GTTIFSHGSA AAAAMEPEAE EPPAQKRGFT RFFSPERFVK QELFGSPERP GISKVMTDAF NIMQDRITRA RLAGDPPDLL ISPRVGRIGW FDFHRADEII AHGARAAERA IDSIREAIEE VAPQPKATVP VET
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