| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3886 |
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| Symbol | thrS |
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| ID | 6411566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4169409 |
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| End bp | 4171472 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713768 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001992859 |
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| Protein GI | 192292254 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA AAACTTCGGG CGACAAGCCT TCCGCGTCCA CCTCCGGCTT CCAATACACG
CTCTCCAACC TCAAGCCGGT AGCCCCCATG GACCAGATCA CCATCACCTT CCCCGACGGC
AAGACCCGCG AATATCCCCG CGGCACCACC GGGCTCGACA TCGCCAAGGG CATTTCGCCC
TCACTCGCCA AGCGCACCGT CGTGATGGCG CTGAACGGCA CGCTGACCGA CCTCGCCGAT
CCGATCGAAG ACAATGCCCA GATCGACTTC GTCGCCCGTG ACGATGCGCG CGCGCTGGAA
TTGATCCGGC ACGACTGCGC CCACGTGCTC GCCGAAGCGG TGCAAAGCCT GTGGCCGGGC
ACCCAGGTGA CCATCGGCCC GACCATCGAA AACGGCTTCT ACTACGACTT CTTCCGCAAC
GAGCCGTTCA CCCCGGAAGA CTTCGCGGCG ATCGAGAAGA AGATGCGCGA GATCATCGCG
CGCGACAAAC CGTTCACCAA GGAAGTCTGG ACCCGCGACG AAGCCAAGAA GGTGTTCGCC
GACAACGGCG AGGCGTTCAA GGTCGAGCTG GTCGACGCCA TCCCCGAAGA CCAGACCATC
AAGATCTACA AGCAGGGCGA ATGGTTCGAT CTGTGCCGCG GCCCGCACAT GACCTCGACC
GGCAAGATCG GCACCGCCTT CAAGCTGATG AAGGTGGCGG GCGCGTATTG GCGCGGCGAC
AGCAACAATC CGATGCTGAC CCGCATCTAC GGCACCGCCT TCGCCAAGCA GGACGACCTC
GACGCCTACC TTCATCAGAT CGAGGAAGCC GAGAAGCGCG ACCACCGCAA GCTCGGCCGT
GAACTCGACC TGTTCCACTT CCAGGAAGAA GGTCCGGGCG TGGTGTTCTG GCACGCCAAG
GGCTGGAGCC TGTTCCAGTC GCTGGTCGGC TATATGCGCC GCCGCCTCGC CGGCGACTAC
GACGAGGTCA ACGCGCCGCA GATCCTCGAC AAGGTGCTGT GGGAGACCTC GGGCCATTGG
GAATGGTACC GCGAGAACAT GTTCGCGGCG CAGTCCGCCG GCGACGACGC CGAGGACAAG
CGCTGGTTCG CGCTGAAGCC GATGAACTGC CCGGGCCACG TGCAGATCTT CAAACATGGC
TTGAAGAGCT ATCGCGACCT GCCGCTGCGG CTCGCCGAGT TCGGCGTGGT GCATCGCTAC
GAGCCGTCGG GCGCCATGCA CGGCCTGATG CGGGTGCGCG GCTTCACCCA GGACGACGCG
CACGTGTTCT GCACCGAGGC GCAGCTCGCC GAGGAGTGCA TCAAGATCAA CGACCTGATC
CTGTCGACCT ACTCCGACTT CGGCTTCGAG GGCGAGTTGA CGGTGAAGCT GTCGACCCGG
CCGGAGAAGC GCGTCGGCAC CGACGAGATG TGGGATCACG CCGAGCGCGT GATGGCCACG
GTGCTCTCCG AGATCAAGGC CAAGGGCGGC AACCGCATCA AGACCGAGAT CAACCCGGGC
GAAGGCGCGT TCTACGGGCC GAAGTTCGAA TACGTGCTGC GCGACGCGAT CGGCCGCGAT
TGGCAGTGCG GCACCACGCA GGTCGACTTC AACCTGCCGG AGCGGTTCGG CGCGTTCTAC
ATCGACGCCG ACGGCGCCAA GAAGGCACCG GTGATGGTGC ATCGCGCGAT CTGCGGCTCG
ATGGAGCGTT TCACCGGCAT CCTGATCGAG CACTACGCCG GCAACTTCCC GCTGTGGCTG
GCGCCGGTGC AGGTCGTCGT CACCACGATT ACGTCGGAAG GCGACGACTA CGCCAAGAAG
GTGCTGGCGG CGCTGCGCAA GGCCGGCTTG CGCGCCGACA TCGATCTGCG CAACGAGAAG
ATCAACTTCA AGGTGCGCGA GCATTCGCTC GCCAAGGTCC CCGCCCTGCT GGTGGTCGGC
AAGAAGGAGG CCGAAAGCCA CTCGGTCTCC GTCCGCCGCC TCGGCAGCGA GGGCCAGAAG
GTGATGCCCA CCGACGAAGC GATCGCCGCG CTGGTGGACG AAGCGACCCC GCCGGACGTG
AAGCGGATGC GCGGAGCGGC GTAA
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| Protein sequence | MNDKTSGDKP SASTSGFQYT LSNLKPVAPM DQITITFPDG KTREYPRGTT GLDIAKGISP
SLAKRTVVMA LNGTLTDLAD PIEDNAQIDF VARDDARALE LIRHDCAHVL AEAVQSLWPG
TQVTIGPTIE NGFYYDFFRN EPFTPEDFAA IEKKMREIIA RDKPFTKEVW TRDEAKKVFA
DNGEAFKVEL VDAIPEDQTI KIYKQGEWFD LCRGPHMTST GKIGTAFKLM KVAGAYWRGD
SNNPMLTRIY GTAFAKQDDL DAYLHQIEEA EKRDHRKLGR ELDLFHFQEE GPGVVFWHAK
GWSLFQSLVG YMRRRLAGDY DEVNAPQILD KVLWETSGHW EWYRENMFAA QSAGDDAEDK
RWFALKPMNC PGHVQIFKHG LKSYRDLPLR LAEFGVVHRY EPSGAMHGLM RVRGFTQDDA
HVFCTEAQLA EECIKINDLI LSTYSDFGFE GELTVKLSTR PEKRVGTDEM WDHAERVMAT
VLSEIKAKGG NRIKTEINPG EGAFYGPKFE YVLRDAIGRD WQCGTTQVDF NLPERFGAFY
IDADGAKKAP VMVHRAICGS MERFTGILIE HYAGNFPLWL APVQVVVTTI TSEGDDYAKK
VLAALRKAGL RADIDLRNEK INFKVREHSL AKVPALLVVG KKEAESHSVS VRRLGSEGQK
VMPTDEAIAA LVDEATPPDV KRMRGAA
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