Gene Rpal_3731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3731 
Symbol 
ID6411409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3992185 
End bp3992751 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content62% 
IMG OID642713613 
Producthypothetical protein 
Protein accessionYP_001992706 
Protein GI192292101 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.352743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGGA CCGCGCTCGT TCTCGGCTGT CTGCTGGTCG CCACCCCGAC GCTGGCGCAA 
TCGGTCACCG AGAAAACCGG CGTCAATTCG GTGCTCGGCA TCGCGCCGAC CACGCCCGAT 
TTCGTCAAGC AGGTCGCGAT CAGCGACATG TTCGAGATCC AGTCGAACCA GCTCGCCGAG 
CGCAAGGGCA ATGCCGCCCA GCAAGCGTTC GCCAAGCAGA TGATCGCCGA TCACACCAAG 
ACCTCGAGTG AGCTGAAGGC GATGGTGTCG GACGGCAAGG TCAAGGCGGA GCTGCCGACC 
GCACTCGACT CCACCCATCA GAGCAAGCTC GACAAGCTGA AGAATGCCAA CGGCGCCGAA 
TTCAGCGAGA CCTTCGACGA ACAGCAGGTC AGCGCGCACA AGGACGCGGT GTCGCTGTTC 
GAACGCTACG CCAAGGGCGG CGACAACGAC GCGCTGAAGA AGTGGGCGGG CACCACGCTG 
CCGAAGCTCC AGCACCATCT CGAAATGGCG CAGCAGCTCG AACGTGACCG CACCAACACC 
ACTTCGGAGT CGAAAGCGAA GAAGTGA
 
Protein sequence
MNRTALVLGC LLVATPTLAQ SVTEKTGVNS VLGIAPTTPD FVKQVAISDM FEIQSNQLAE 
RKGNAAQQAF AKQMIADHTK TSSELKAMVS DGKVKAELPT ALDSTHQSKL DKLKNANGAE 
FSETFDEQQV SAHKDAVSLF ERYAKGGDND ALKKWAGTTL PKLQHHLEMA QQLERDRTNT 
TSESKAKK