| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3710 |
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| Symbol | |
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| ID | 6411387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3969979 |
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| End bp | 3971211 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713591 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001992685 |
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| Protein GI | 192292080 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCA CGATGTCCGA TCGCCAGCGT GAATGGCTGG ACCGCGTCAC CAAGTTCATG
AACGACCACG TCCGCCCCGC GGTGCCGATC TACAAGCAGC AGGACGCCGA GGGCGAGCGC
TGGAAGGTGA TCCCGGTCCT CGAGGAGCTG AAGGCCAAGG CGAAGGCCGA AGGTCTGTGG
AACCTGTTCC TGCCGCCGTC CTCGCACGAC GACGATGAAT TCCACGGTGC GGGTCTCTCC
AACCTCGAAT ACGCGCTGCT GTCGGAGCAG ATGGGCCACA TCTCCTGGGC CTCCGAAGTG
TTCAACTGCT CGGCGCCGGA CACCGGCAAC ATGGAAGTGC TGTTCCGTTA CGGCACCAAG
GAGCAGAAGC AGAAGTGGCT GCGGCCGCTG ATGGCCGGCG AGATCCGTTC GGCGTTCCTG
ATGACCGAGC CGGCGGTGGC CTCGTCGGAT GCCACCAACA TCGAGACCCG GATCGAGAAG
GACGGCGATC ACTACGTCAT CAACGGCCGC AAGTGGTGGT CGTCGGGCGT CGGCGATCCG
CGCTGCAAGA TCGCGATCGT GATGGGCAAG ACCGATCCGA ACGCCGCGCG CCATCAGCAG
CAGTCGCAGA TCCTGGTGCC TCTCGACACC CCCGGCATCA CCATCGAGAA GATGCTGCCG
GTGTTCGGCT TCGATGACGC GCCGCACGGT CACGGCATGG TCAAGCTGGA GAACGTCCGC
GTTCCGGCGT CCAACCTCTT GCTCGGCGAG GGGCGCGGCT TCGAGATCGC CCAGGGCCGC
CTCGGCCCGG GCCGCATCCA TCATTGCATG CGCACCATCG GCAAGGCCGA AGAAGCGCTG
GAGAAGATGG TCAAGCGCCT GCAGTCGCGC GTCGCGTTCG GCAAGCGGAT CATCGAATTC
TCGGTGTGGG AGCAGCGGAT CGCCGAAGCC CGCATCGACA TCGAGATGAA CCGTCTGCTG
TGCCTCAAGG CCGCCGACAT GATGGATAAG GTCGGCAACA AGACCGCGCA GCTCGAGATC
GCGATGATCA AGGTGGCGGC GCCGCGGATG GCGCAGCGCA TCATCGACGA AGCGATCCAG
GCATTCGGCG GCGCCGGCGT GTCCGACGAC GCGGGTCTGG CCAAGGATTA CGCCAACATC
CGCACGCTGC GGCTCGCGGA CGGTCCGGAC GAGGTGCACA ACCGCGCCAT CGCCCGCCTG
GAGATGAAGA AGTACGCCAA CGCGGCGCAC TGA
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| Protein sequence | MDFTMSDRQR EWLDRVTKFM NDHVRPAVPI YKQQDAEGER WKVIPVLEEL KAKAKAEGLW
NLFLPPSSHD DDEFHGAGLS NLEYALLSEQ MGHISWASEV FNCSAPDTGN MEVLFRYGTK
EQKQKWLRPL MAGEIRSAFL MTEPAVASSD ATNIETRIEK DGDHYVINGR KWWSSGVGDP
RCKIAIVMGK TDPNAARHQQ QSQILVPLDT PGITIEKMLP VFGFDDAPHG HGMVKLENVR
VPASNLLLGE GRGFEIAQGR LGPGRIHHCM RTIGKAEEAL EKMVKRLQSR VAFGKRIIEF
SVWEQRIAEA RIDIEMNRLL CLKAADMMDK VGNKTAQLEI AMIKVAAPRM AQRIIDEAIQ
AFGGAGVSDD AGLAKDYANI RTLRLADGPD EVHNRAIARL EMKKYANAAH
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