| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3708 |
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| Symbol | |
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| ID | 6411385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3967699 |
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| End bp | 3968658 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713589 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001992683 |
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| Protein GI | 192292078 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.251255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTG CAGTGCCGCT TGCGGTTGCG GCCGGCGTCG ATGCCGGCCA ACGTTTCCTC
GATGTCGCGC TGGCTCCGTC GGGCCAGACC TTCCGGATGC CTAATCTGGC CGAGGGCATC
GCCGAGATCA TCGCCCGCCT CGAACGCTCC GGCGTCAGGC GGGTGGTTCT GGAGGCGATC
GGCCCCTGTG CCGAACCGCT GGTCAAAGCG CTTTCGGTCG CCGGCTTCGA AGTCGGTATC
GTCAATCCGC GCCGGATCAA GGCGTTCCGC GAGGCCGAAG GCAGTCGCGC CAAGACCGAC
AGGCTAGACG CGCGGCTGAT TGCGCGCTTC GCTCTGACTA TGCCCGAGAC CCTGCGCCCC
CTGCCGACCG ACACCCAACT CGAGCTGAAG GCGTTGTCGC TGCGACGCCG CCAGCTCACC
GAGATGATCG CGATGGAGAA GACCCGGATG AAGCAGGTCC GCGGCACGCT CCTGCTCGAT
AGTCATCGGG CCGCGATCGC CGCGTTGTCG GCGCAGTGCC AAGCCATCGA GGCCGAACTC
GCCAAGCGCA TCGGCGACGA CGCCGAACTC CGCCGCGTCC TTCACATCCT CAAATCGATC
CCCGGCATCG GCGAACGGGT GGCTACGCTC CTCATTACCG ACCTCCCCGA ACTCGGCCAG
CGCGATCGCA AGGCCATCGC CAGCCTCGCA GGGCTCGCGC CCCACGTCAG CCAATCCGGC
GCAGCGCCAC CTCGCGCCGC CATCGCCGGC GGGCGTCCTT GCGTTCGGGC CGCGCTCTAC
ATGGCCGCCC TGGTCGCCGC CCGCCACCAC CCCAAGCTCC GCGACGACTA CAACGCCCTT
CGCCTGCAAG GAAAACCCGG AAAGGTCGCG CTCATCGCAA TCGCCCGAAA ACTGCTCGTC
ACAGCCAACG CACTCGTCAA AGCCGACACG CCATATCAAG GTAAGACCCT TGACACATGA
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| Protein sequence | MTIAVPLAVA AGVDAGQRFL DVALAPSGQT FRMPNLAEGI AEIIARLERS GVRRVVLEAI
GPCAEPLVKA LSVAGFEVGI VNPRRIKAFR EAEGSRAKTD RLDARLIARF ALTMPETLRP
LPTDTQLELK ALSLRRRQLT EMIAMEKTRM KQVRGTLLLD SHRAAIAALS AQCQAIEAEL
AKRIGDDAEL RRVLHILKSI PGIGERVATL LITDLPELGQ RDRKAIASLA GLAPHVSQSG
AAPPRAAIAG GRPCVRAALY MAALVAARHH PKLRDDYNAL RLQGKPGKVA LIAIARKLLV
TANALVKADT PYQGKTLDT
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