Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3669 |
Symbol | |
ID | 6411345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3916902 |
End bp | 3918092 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642713549 |
Product | elongation factor Tu |
Protein accession | YP_001992644 |
Protein GI | 192292039 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAG CAAAGTTTGA ACGTACGAAG CCGCATTGCA ACATCGGGAC GATCGGTCAC GTCGACCACG GCAAGACGTC GCTGACGGCG GCGATCACCA AGGTTCTGGC GGAGACGGGC GGTGCGACGT TCACGGCCTA TGACCAGATC GACAAGGCGC CGGAAGAGAA GGCGCGCGGC ATCACGATCT CGACCGCGCA CGTCGAGTAC GAGACGCAGA ACCGTCACTA CGCGCACGTC GACTGCCCCG GCCACGCGGA CTACGTGAAG AACATGATCA CCGGCGCGGC GCAGATGGAC GGCGCGATCC TGGTGGTGTC GGCGGCCGAC GGCCCGATGC CGCAGACCCG CGAGCACATC CTGCTGGCCC GTCAGGTCGG CGTGCCGGCG CTGGTGGTGT TCCTGAACAA GTGCGACATG GTCGACGATC CGGAACTGCT CGAGCTGGTC GAGATGGAAG TGCGCGAGCT TCTGTCGAAG TACGACTTCC CGGGCGACGA CATTCCGATC GTCAAGGGTT CGGCGCTGGC GGCGCTGGAG AACTCGGACG CCAAGCTCGG TCACGACGCG ATCCTGGAGC TGATGCGCCA GGTCGACGCC TACATCCCGC AGCCGGAGCG TCCGATCGAC CAGCCGTTCC TGATGCCGGT GGAAGACGTG TTCTCGATCT CGGGCCGCGG CACCGTGGTG ACCGGCCGTG TCGAGCGCGG CATTCTGAAG GTCGGCGACG AAATCGAGAT CGTCGGCATC CGCGACACGC AGAAGACCAC CTGCACCGGC GTCGAAATGT TCCGCAAGCT GCTCGATCAG GGCCAGGCGG GCGACAACAT CGGCGCGCTG CTGCGCGGCA CCAAGCGTGA GGACGTCGAG CGTGGCCAGG TGCTGTGCAA GCCGGGTTCG GTGAAGCCGC ACACCAAGTT CAAGGCCGAA GCCTACATTC TGACCAAGGA AGAGGGCGGC CGCCACACCC CGTTCTTCAC CAACTACCGT CCGCAGTTCT ACTTCCGCAC CACCGACGTG ACCGGTGTTG TGCACCTGCC GGAAGGCACC GAGATGGTGA TGCCGGGCGA CAACATCGCG ATGGAAGTGC ACCTGATCGT GCCGATCGCG ATGGAAGAAA AGCTGCGCTT CGCCATCCGC GAAGGCGGCC GCACGGTGGG CGCCGGCGTC GTCGCCGCGA TCATCGAGTA A
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Protein sequence | MAKAKFERTK PHCNIGTIGH VDHGKTSLTA AITKVLAETG GATFTAYDQI DKAPEEKARG ITISTAHVEY ETQNRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI LLARQVGVPA LVVFLNKCDM VDDPELLELV EMEVRELLSK YDFPGDDIPI VKGSALAALE NSDAKLGHDA ILELMRQVDA YIPQPERPID QPFLMPVEDV FSISGRGTVV TGRVERGILK VGDEIEIVGI RDTQKTTCTG VEMFRKLLDQ GQAGDNIGAL LRGTKREDVE RGQVLCKPGS VKPHTKFKAE AYILTKEEGG RHTPFFTNYR PQFYFRTTDV TGVVHLPEGT EMVMPGDNIA MEVHLIVPIA MEEKLRFAIR EGGRTVGAGV VAAIIE
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