| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3666 |
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| Symbol | rplD |
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| ID | 6411342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3915108 |
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| End bp | 3915728 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713546 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001992641 |
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| Protein GI | 192292036 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTGA AAGTCACCAC CCTCGAGGGT AAGGAAGCCG GTTCGGTCCA GCTCTCCGAC
GAGATCTTCG GTCTGGAGCC GCGCTCTGAC ATCATTCAGC GTTGTGTGAT CTGGCAGCTC
GCCAAGCGGC AGGCCGGCAC CCACAAGGCC AAGGGCCGCG CCGAAGTTTG GCGCACCGGC
AAGAAGATGT ACAAGCAGAA GGGCACCGGC GGTGCTCGTC ACGGTTCGCA GCGGGTTCCG
CAGTTCCGTG GCGGCGGTCG CGCCTTCGGC CCGGTGGTGC GTTCGCACGC CATCGACCTG
CCGAAGAAGG TGCGTGTCCT GGCGCTGCGT CATGCGCTCT CGGCCAAGGC CAAGGGCGGC
GGTCTGATCG TGCTCGACAA GGCCGAGCTC GAAGCCGCCA AGACCAAGAC GCTGGTCGGT
CACTTCTCGG GCCTCGGCCT CGAGAGCGCG CTGATCATTG ACGGTGCCGA GGTGAACAAT
GGTTTCGCCG CGGCGGCCCG CAACATCCCG AACATCGACG TGCTGCCGGT TCAGGGCATC
AACGTCTATG ACATTCTGCG CCGCAAGAAG CTGGTGCTGA CCAAGGCGGC GGTCGATGCG
TTGGAGGCGC GCTTCAAATG A
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| Protein sequence | MELKVTTLEG KEAGSVQLSD EIFGLEPRSD IIQRCVIWQL AKRQAGTHKA KGRAEVWRTG
KKMYKQKGTG GARHGSQRVP QFRGGGRAFG PVVRSHAIDL PKKVRVLALR HALSAKAKGG
GLIVLDKAEL EAAKTKTLVG HFSGLGLESA LIIDGAEVNN GFAAAARNIP NIDVLPVQGI
NVYDILRRKK LVLTKAAVDA LEARFK
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