Gene Rpal_3652 details

Gene Information

• Locus tag: Rpal_3652
• Symbol: rplF
• ID: 6411328
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 3908921
• End bp: 3909454
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642713532
• Product: 50S ribosomal protein L6
• Protein accession: YP_001992627
• Protein GI: 192292022
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGCG TTGGCAAGAA GCCCGTCACG GTCCCGTCTG GGGTGACGGC GACCGTCGAG 
GGACAGACCG TCAAGATGAA GGGGCCGAAG GGCCAGCTTC AGTTCGTCGT GCACGACGAC 
GTCGACGTGA AGTTCGAGGA CGGTGCGGTC AAGGTGGCGC CGCGGCACGA GACCAATCGT 
GCCCGTGCGC TGTACGGGAC GGCTCGCGCT CAGATCGCGA ATCTGGTGGA AGGCGTCACC 
AAGGGCTTCG AGAAGAAGCT CGAGATCACC GGCGTCGGCT ATCGCGCGGC GATGCAGGGC 
AAGAAGCTGC AGCTCGCGCT CGGCTACAGC CACGACGTGC TGTACGACAT CCCGGAAGGC 
ATCACCATCA CGGTGCCGAA GCCGACCGAG ATCAATGTCG TCGGCATCGA CCCTCAGAAG 
GTCGGCCAGG TCGCCGCTGA GATCCGCGAC TACCGTCCGC CGGAGCCGTA TAAGGGTAAG 
GGCGTGCGTT ACGCCGACGA ATTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRVGKKPVT VPSGVTATVE GQTVKMKGPK GQLQFVVHDD VDVKFEDGAV KVAPRHETNR 
ARALYGTARA QIANLVEGVT KGFEKKLEIT GVGYRAAMQG KKLQLALGYS HDVLYDIPEG 
ITITVPKPTE INVVGIDPQK VGQVAAEIRD YRPPEPYKGK GVRYADEFIF RKEGKKK