| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3633 |
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| Symbol | |
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| ID | 6411309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3891845 |
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| End bp | 3893053 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713513 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001992608 |
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| Protein GI | 192292003 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAGTC TTCGGCTCTG GCTCGGCGCC GCTTTTGCGG CGGCGCTTGC CACCGCGGCG
CAGGCGCAGC AGAACGCGCC CGGCGTCACC GCCACCGAGA TCAAGATCGG CAACACCATG
CCGTATAGCG GGCCGGCGTC GGCCCTCAGC TCGACCGGCA AGGCGATCGC CGCCTATCTC
GACCAGGTCA ACGAGCAGGG CGGCGTGAAC GGCCGTAAGA TCACGATGAT CTCGCTCGAC
GACGGCTTCT CGCCGCCGAA AACCATGGAG GCGACGCGGC GGCTGGTCGA AGGCGACGGC
GTCGCGTTCA TCGCCGCCAC CATGGGCACC GCGCCGAGCT CGGCGATCGC CAAATATCTC
AACACCAACA AGGTGCCGCA GATCTTCCTG ATCAGCTCGG CATCGAAGTG GAACGACCCC
GCCAACATGC CGTGGTCGAT GGCGCTGCCG TGGGCGCCGA ACTACATGAG CGAGGCCAAG
ATCGAGGTCG CCTATGCGCG CGCCAAGAAC CCCAACGCGC GGTTCGCGGT GCTGTATCAG
AACGACGACG CCGGCAAGGA CTTCATGCGC GGCGTCAAGG ATGCCCTCGG CCCCGACGCC
GACAAGGCGA TCGCGCTGGC ATCGAGCTTC GAGGTCTCCG ATCCCACCGT CGACTCCCAG
GTGCTGACAC TCGCCAACAC CAAGGCCGAC GTGTTCATGA TCTACAGCGT GACGCCACGC
GCCTGTGCCC AGGCGCTGCG CAAGGCGCAC GAGATCGGCT GGCGGCCGAT TCGTTTCCTC
GCCAGCGGCT GCGCCAACAA GGCCACCGTG ATGGACCCGG CCGGCGTCGA CGCCGGGAAG
GGCGTGCTGT CGCTCGGCTC GCTCAAGCCC TATGTGGCCG AGCCGAAGGA CGACAAGGCA
ATGAGCGCCT ACATCGCCTT CATGAAGGCG AGGCTGCCGG GCCTCGACCC GAACAACATC
GGCACCGTGT ACGGCTACAC GGTGGGCGAG GCGCTGGTGG CGCTGCTGAA GCAGTGCGGC
AACGATCTTT CCCGCGACAA CATCATGCGG CAGGCGGCGA ATATGAAGAA CGTGCCGCTG
TCGCTGCTGC TGCCCGGCAT CACCCTGAAC ACCTCGCCGA CCGACTTCCG CCCGATCAAG
GACGGTTATC TCTTGGAGTT CAACGGCAAC GATTGGGTCG TCGTCAGCGA AATGCTGCGC
GGCACTTGA
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| Protein sequence | MRSLRLWLGA AFAAALATAA QAQQNAPGVT ATEIKIGNTM PYSGPASALS STGKAIAAYL
DQVNEQGGVN GRKITMISLD DGFSPPKTME ATRRLVEGDG VAFIAATMGT APSSAIAKYL
NTNKVPQIFL ISSASKWNDP ANMPWSMALP WAPNYMSEAK IEVAYARAKN PNARFAVLYQ
NDDAGKDFMR GVKDALGPDA DKAIALASSF EVSDPTVDSQ VLTLANTKAD VFMIYSVTPR
ACAQALRKAH EIGWRPIRFL ASGCANKATV MDPAGVDAGK GVLSLGSLKP YVAEPKDDKA
MSAYIAFMKA RLPGLDPNNI GTVYGYTVGE ALVALLKQCG NDLSRDNIMR QAANMKNVPL
SLLLPGITLN TSPTDFRPIK DGYLLEFNGN DWVVVSEMLR GT
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