| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3624 |
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| Symbol | |
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| ID | 6411300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3880015 |
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| End bp | 3881382 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713504 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001992599 |
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| Protein GI | 192291994 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCC GCGTCAAGAA ACCTCTCGCC AAGCGTGGCC CCGACGGCAC GCGCGGCAAG
CCGGCGCGCG CCGGGCTGGG CGCCAAGACC GGAAAATCGG CCGCCGGCAA AGCTGTCGCG
GGCAAGCCTG GCGCAGGCAA GCCCGGTGGT GCCAAGCTGT CGCGCGATGC CAAGCCGCTG
CGCGCCGGCG CGCCTGCGAA GACCTCGCGC GGCGAGGGCG CGGCGCGGCC GCCGCGGTCC
GGTGACACGC CAATGCGGTT CGGTGCCGGT CCGGCGCGGC CATCGCGTCC GCCGGGCGAG
GGCAGGCCGC GCGCGGCGCA GGCGGCGCCG GGCGAGACCC ACGAGCGGCC CGAGGCCAAG
CCCGAGGCGC CGCTGCCGAC CAAGGTCGAG ACCGTCACCG TCACCGCAGA TGAGAACGGC
ATGCGGGTCG ATCGCTTCCT CGAAGCGCGG TTTCCCGGCC TGTCGTTCTC CCACATCCAG
CGCATCGTCC GGAAGGGCGA GCTGCGGGTG AACGGCAAGC GCGCCGACTC CAAGGACCGG
CTCGAAGAGG GCCAGAGCGT GCGCATCCCG CCGCTCAAGC TGGATACCCC GAAGCTGCCC
GGGCATCTGT CCGAAGCCGA GCAGAAGACG TTGCAGACGC TAAAGGCGAT GACGCTGTTC
GAAGACGCCG ACGTCTTGGT GCTGAACAAG CCGGCCGGGC TCGCGGTGCA GGGCGGCTCC
GGCACCACGC GGCACATCGA CCAGATGCTC GAAGTGCTGC GCGACGCCAA GGGCCAGAAG
CCGCGCCTGG TGCACCGCAT CGACAAGGAG ACCGCCGGCT GTCTCTTGGT CGCCAAGACC
CGGTTCGCTG CCACCGCGCT GACCGGCTCG TTCCGCCACC GCTCGGCGCG CAAGATCTAC
TGGGCGTTGG TCGCCGGTGT GCCGAAGCCG AAGCAGGGGC GGATCTCGAC CTATCTCGCC
AAGGAAGAGA GCGAGGACGA CAGCATCATG CGCGTCGCCA AGCATGGCGA CGACGGCGCC
AGCCATGCGG TGACCTACTA CGCGGTGGTC GAAACCTCGG GGCAGAAGCT GGCCTGGGTG
TCGCTGAAGC CGGTGACCGG GCGCACCCAT CAGCTCCGCG CCCACATGGC GCATATCGGC
CACGCCATCG TCGGTGATCC GAAGTACTTC AACATCGAGA ACTGGCAGTT GCCCGGGGGC
TTGCAGAACC GGCTGCATCT GCTCGCGCGC CGCATCGTGA TCCCGCATCC GCGCGGCGGC
GTGATCGACG TCTCGGCGCC GCTGCCGCCG CACATGCTGC AGAGCTGGAA CCTGCTCGGC
CTCGAGCACG ACCGGTTCGA TCCGATCGAA CATGCGCCGG AAGAATGA
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| Protein sequence | MSRRVKKPLA KRGPDGTRGK PARAGLGAKT GKSAAGKAVA GKPGAGKPGG AKLSRDAKPL
RAGAPAKTSR GEGAARPPRS GDTPMRFGAG PARPSRPPGE GRPRAAQAAP GETHERPEAK
PEAPLPTKVE TVTVTADENG MRVDRFLEAR FPGLSFSHIQ RIVRKGELRV NGKRADSKDR
LEEGQSVRIP PLKLDTPKLP GHLSEAEQKT LQTLKAMTLF EDADVLVLNK PAGLAVQGGS
GTTRHIDQML EVLRDAKGQK PRLVHRIDKE TAGCLLVAKT RFAATALTGS FRHRSARKIY
WALVAGVPKP KQGRISTYLA KEESEDDSIM RVAKHGDDGA SHAVTYYAVV ETSGQKLAWV
SLKPVTGRTH QLRAHMAHIG HAIVGDPKYF NIENWQLPGG LQNRLHLLAR RIVIPHPRGG
VIDVSAPLPP HMLQSWNLLG LEHDRFDPIE HAPEE
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