Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3606 |
Symbol | |
ID | 6411282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3861377 |
End bp | 3861769 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642713486 |
Product | protein of unknown function DUF35 |
Protein accession | YP_001992581 |
Protein GI | 192291976 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.215549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCC CCGTCAAGTA CCCCGCGCCT CAGGGCAGCG CCGAAACCAA GCCGTTCTGG GATGCGGCGA CCGAAGGCAA ACTGCTGATC AAGCGTTGCA CCTCCTGCGG CGAAGCGCAC TACTTCCCGC GCGCGCTGTG CCCGTTCTGC TTCTCCGACC AGACGGTGTG GGAAGAGAGC AAGGGTGAGG GCGAGATCTA CAGCTACAGC CTGATGCGCA AGTCGCCGAC CGGTCCCTAT GCGATCGGCT ACGTCACGCT GAAGGAAGGC CCGTCGGTTC TGACCAATTT CGTCGACTGC GATTTCGGCC AGCTGAAGAT CGGCACCGAG GTCAAGGTGG TGTTCAAGCC AACCGACGGC GGCGCGCCGC TGCCGTTCTT CACGGTGGCC TGA
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Protein sequence | MNSPVKYPAP QGSAETKPFW DAATEGKLLI KRCTSCGEAH YFPRALCPFC FSDQTVWEES KGEGEIYSYS LMRKSPTGPY AIGYVTLKEG PSVLTNFVDC DFGQLKIGTE VKVVFKPTDG GAPLPFFTVA
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