Gene Rpal_3606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3606 
Symbol 
ID6411282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3861377 
End bp3861769 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content63% 
IMG OID642713486 
Productprotein of unknown function DUF35 
Protein accessionYP_001992581 
Protein GI192291976 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.215549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCC CCGTCAAGTA CCCCGCGCCT CAGGGCAGCG CCGAAACCAA GCCGTTCTGG 
GATGCGGCGA CCGAAGGCAA ACTGCTGATC AAGCGTTGCA CCTCCTGCGG CGAAGCGCAC
TACTTCCCGC GCGCGCTGTG CCCGTTCTGC TTCTCCGACC AGACGGTGTG GGAAGAGAGC
AAGGGTGAGG GCGAGATCTA CAGCTACAGC CTGATGCGCA AGTCGCCGAC CGGTCCCTAT
GCGATCGGCT ACGTCACGCT GAAGGAAGGC CCGTCGGTTC TGACCAATTT CGTCGACTGC
GATTTCGGCC AGCTGAAGAT CGGCACCGAG GTCAAGGTGG TGTTCAAGCC AACCGACGGC
GGCGCGCCGC TGCCGTTCTT CACGGTGGCC TGA
 
Protein sequence
MNSPVKYPAP QGSAETKPFW DAATEGKLLI KRCTSCGEAH YFPRALCPFC FSDQTVWEES 
KGEGEIYSYS LMRKSPTGPY AIGYVTLKEG PSVLTNFVDC DFGQLKIGTE VKVVFKPTDG
GAPLPFFTVA