| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3521 |
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| Symbol | gatC |
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| ID | 6411195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3767996 |
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| End bp | 3768283 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713399 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
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| Protein accession | YP_001992496 |
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| Protein GI | 192291891 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
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| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00942593 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGGTCG ATGCCGCCAC TGTTCGCCGC ATCGCGCATT TGGCGCGGAT CGCCGTGACC
GAGGACGAGG TGCCGCATCT GCAGGGCGAG CTCAACGCGA TGCTCGCCTT CGTCGAGCAG
TTGTCGGAGG TCGATGTCGA CGGCGTCGAG CCGATGACCT CGGTGACGCC GATGCAGATG
AAGAAGCGCG CCGACGTGGT CAATGACGGC GAAATCGCCG ATCAGGTGGT GGCGAATGCC
CCATCGACCG AGGATCACTT CTTCTTGGTG CCGAAGGTGG TCGAATAA
|
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| Protein sequence | MSVDAATVRR IAHLARIAVT EDEVPHLQGE LNAMLAFVEQ LSEVDVDGVE PMTSVTPMQM
KKRADVVNDG EIADQVVANA PSTEDHFFLV PKVVE
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