| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3501 |
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| Symbol | |
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| ID | 6411175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3748553 |
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| End bp | 3750082 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713380 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001992477 |
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| Protein GI | 192291872 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCGA TGCTCAGCTC TTCCGACGAC GCCGCAACGC CCGCTTCGGA CGCTCGCGAC
CAACACATCC TCGACGATAC CGTTTTCGAT ACCGATGGTG ACACGCTGCG CGAAGAGTGC
GGCGTGTTCG GCATTTTCGG GCACCCCGAT GCCGCCGCGA TCACCGCGCT CGGCCTGCAC
GCCCTGCAAC ACCGCGGCCA GGAAGCCGCC GGCATCGTCT CGTTCGACAA CGGCCGGTTT
CATTCCGAGC GCCGCCTCGG CCTGGTCGGC GACACCTTCT CCCGCGCCGA CGTAATCGCG
CGGCTGCCGG GCAATTCGGC GATCGGCCAC GTCCGCTATT CGACCACCGG CGAGACCATC
CTGCGCAACG TGCAGCCGCT GTTCGCCGAG CTCAATGCCG GCGGCTTCGC GGTCGGCCAC
AACGGCAATC TCACCAACGG CCTCACCCTG CGCCGCGAGC TGATCCGCAG CGGCGCGATC
ATGCAGTCGA CCACCGACAC CGAAGTGATC CTGCATCTGG TCGCGCACTC CAAGAAGACC
CGCTTCATCG AGCGCTTCAT CGAGTCGCTC CGCGCGCTGG AAGGCGCCTA CTCGCTGGTG
TCGCTGACCA ACAAGAAGCT GGTCGGCGCC CGCGATCCGC TCGGCATCCG CCCGCTTGTG
CTCGGCGAAC TCGACGGCTG CCCGATCCTG GCGTCGGAGA CCTGTGCGCT CGACATCATC
GGCGCGCATT ACGTCCGCGA CGTCGAACCC GGCGAAGTCA TCGTGTTCGA CCGCCATGGC
GTCACCAGCC ACAAGCCGTT TCCGCCGCAG CCGCCCCGCC CCTGCATCTT CGAGTACATC
TACTTCGCGC GCCCGGATTC GGTGGTCGGC GGCCGTTCGG TGTACGACGT CCGCAAGGCG
TTCGGCGCCC AGCTCGCGCT CGAGAGCCAC GTCGAATCCG ACGTTGTCGT CCCGGTGCCG
GATTCCGGCG TTCCGGCGGC GATCGGCTAT TCGCGGCAGT CGGGCGTGCC GTTCGAACTC
GGCATCATCC GCAACCACTA TGTCGGCCGC ACCTTCATTC AGCCGACCCA GAGCGTGCGC
GAACTCGGCG TGCGGATGAA GCACTCGGCG AACCGCGCCG CGATCGAAGG CAAGCGGATC
GTGCTGATCG ACGACAGCCT CGTCCGCGGC ACGACCTCGA AGAAGATCGT GAAGATGATG
CGCGATGCCG GCGCACGCGA GGTGCATTTC CGCATCGCCT CGCCGCCGAT CACGCACCCG
GACTACTACG GCATCGACAC CCCGGATCGC GCCGGCCTGC TGGCCGCGAC GCATTCGCTC
GAAGAGATGC GCGACCTGAT CGGCGCCGAC ACGCTCGCGT TCCTGTCGGT CGATGGCATC
TATCGCGCGA TGGGCGAACC GGGCCGCGAT CCGGCGTTGC CGAAGTTCAC CGACCACTGC
TTTACCGGTG ACTATCCGAC CGGCCTCACC GATCTCAATC AGACCGAGTC GGCGCCGCGG
CAATTGTCGC TGCTGGCCGA GGCGAGCTGA
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| Protein sequence | MDAMLSSSDD AATPASDARD QHILDDTVFD TDGDTLREEC GVFGIFGHPD AAAITALGLH
ALQHRGQEAA GIVSFDNGRF HSERRLGLVG DTFSRADVIA RLPGNSAIGH VRYSTTGETI
LRNVQPLFAE LNAGGFAVGH NGNLTNGLTL RRELIRSGAI MQSTTDTEVI LHLVAHSKKT
RFIERFIESL RALEGAYSLV SLTNKKLVGA RDPLGIRPLV LGELDGCPIL ASETCALDII
GAHYVRDVEP GEVIVFDRHG VTSHKPFPPQ PPRPCIFEYI YFARPDSVVG GRSVYDVRKA
FGAQLALESH VESDVVVPVP DSGVPAAIGY SRQSGVPFEL GIIRNHYVGR TFIQPTQSVR
ELGVRMKHSA NRAAIEGKRI VLIDDSLVRG TTSKKIVKMM RDAGAREVHF RIASPPITHP
DYYGIDTPDR AGLLAATHSL EEMRDLIGAD TLAFLSVDGI YRAMGEPGRD PALPKFTDHC
FTGDYPTGLT DLNQTESAPR QLSLLAEAS
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