| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3467 |
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| Symbol | |
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| ID | 6411141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3711135 |
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| End bp | 3713012 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713346 |
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| Product | ABC transporter related |
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| Protein accession | YP_001992443 |
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| Protein GI | 192291838 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.364165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCACGC TTACCGACAT TTCGATCCGG CTCGCCGGAC GGCTGCTGAT CGACCAAAGT
TCGGTCCAGA TCGCCCCCGG CGCACGCGTC GGCTTCATCG GCCGCAACGG CGCCGGTAAA
TCCACCCTGT TTCGCGCGAT CCGCGGCGAG CTTGCAACCG AGACCGGCCG CATCACCCTG
CCGCCGCGGT GGCGGATCGG CAGCCTCGCT CAGGAGGCCC CGAACGGCCC CGAGACGCTG
CTGGAAGTGG TGCTGGCCGC CGACGTCGAG CGGGCCGCGC TGCTGCTCGA GGCCGAAACC
GCGCATGACC CGCACCGCAT TGCCGACATT CAGACCCGGC TTGTGGACAT CGACGCGCAC
TCGGCGCCGG CGCGGGCCAG CGCCATTCTC AGCGGCCTCG GCTTCTCCGC CGCCGACCAG
GCCCGCTCCT GCTCGGAATT CTCCGGCGGC TGGCGGATGC GCGTGGCGCT CGCCGCGACG
CTGTTCGCTG CCCCCGACCT GCTGCTGCTC GACGAACCGA CCAACTATCT CGACCTCGAA
GGCACGATGT GGCTCGAGGA CCATCTCGCC AACTATCCGC GCACGGTGAT CGTGATCAGC
CACGATCGCG ACCTGCTCGA TACGTCGGTC AACGAGATCC TGCATCTCGA CCGCGGCCGG
CTGGTACACT TTCGCGGCAG TTACTCGGCC TACGCGGACT TCCGCGCCAA CAAGCTGGCG
CTCGACGCCA AGAATGCCAA GCGTGACGAA GCGCGGCGCA AGCATCTGCA GGACTTCGTC
GACCGCTTCA AGGCCAAGGC GACCAAGGCG CGGCAGGCGC AATCGCGCGT CAAGATGCTG
GAGAAGATGA AGCCGATTGC CCCGCTGGTG GCGGACGACA CCCCGGAGAT CAACTTCCCG
GCGCCCGAGA AAACGCTGTC GCCGCCGATC ATCGCGGTCG ACAACGTCGC GGTCGGCTAC
GATCCGAAGC ACCCGGTTCT GCGGCACGTC ACGCTGCGGA TCGATCCGGA CGACCGCATC
GCGCTGCTCG GCGCCAACGG CAACGGCAAG TCGACGCTGG TGAAGCTGCT GGCAAACCGA
TTGGCGCCGT TCTCGGGATC GGTGACGCGG GCCGACAAGC TATCGATCGC GTACTTCGCG
CAGCATCAAC TCGACGAGCT GAACGAGGAC GGCTCGACCT ATGACCACGT CCGCAAGCTG
ATGCCGGATG CGCCGGAGAG CAGGATCCGG GCGCGCGCCG GCGCCATGGG CTTCTCCGGC
AAGGCGGCCG ACACCCTGGT CAAGAGCCTG TCGGGCGGCG AGAAGGCCCG CCTGCTGCTC
GGGCTCGCGA CCTTCTACGG CCCGAACATG ATCATCCTCG ACGAGCCGAC CAACCACCTC
GACATCGACA GCCGTGCGGC GCTGGCGGAG GCGATCAACG ACTTCCCCGG CGCTGTGATC
ATGGTGTCGC ACGACCGCTA TCTGATCGAC GCCTGCGCCG ATCGACTGTG GGTGGTGGCC
GATCACAAGG TGAAACAGTT CGACGGCGAC CTCGACGATT ATCGCCGAGC CGTGCTGTCA
TCGCGCGGCG CGCGGAGTGG GTCGTCAGAA GCCAAGGACC GCAAGGCCGA TGATAGCGCC
ACCAAGGCGC CGGCATCGCG GCCGAAAAAG GCGGTTCCGC TGAAGCAGCA GATCGCCGAT
GCCGAAGCCG AGATCGACCG CATCACCGCG ATCATCGAGA AGATCGATGC GGCGCTGGCG
ATCCCGGACC TTTTCACCCG TGATCCGAAA CAGGCCGCTC AGCTCAGCAC CGCACGAGCC
AACGCGCAGG CCGCCCTGCA GGCTGCTGAA GAGAAGTGGT TGGAAGCAAG TGCGGCGCAG
GACGCCGCAC AAGGCTGA
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| Protein sequence | MLTLTDISIR LAGRLLIDQS SVQIAPGARV GFIGRNGAGK STLFRAIRGE LATETGRITL
PPRWRIGSLA QEAPNGPETL LEVVLAADVE RAALLLEAET AHDPHRIADI QTRLVDIDAH
SAPARASAIL SGLGFSAADQ ARSCSEFSGG WRMRVALAAT LFAAPDLLLL DEPTNYLDLE
GTMWLEDHLA NYPRTVIVIS HDRDLLDTSV NEILHLDRGR LVHFRGSYSA YADFRANKLA
LDAKNAKRDE ARRKHLQDFV DRFKAKATKA RQAQSRVKML EKMKPIAPLV ADDTPEINFP
APEKTLSPPI IAVDNVAVGY DPKHPVLRHV TLRIDPDDRI ALLGANGNGK STLVKLLANR
LAPFSGSVTR ADKLSIAYFA QHQLDELNED GSTYDHVRKL MPDAPESRIR ARAGAMGFSG
KAADTLVKSL SGGEKARLLL GLATFYGPNM IILDEPTNHL DIDSRAALAE AINDFPGAVI
MVSHDRYLID ACADRLWVVA DHKVKQFDGD LDDYRRAVLS SRGARSGSSE AKDRKADDSA
TKAPASRPKK AVPLKQQIAD AEAEIDRITA IIEKIDAALA IPDLFTRDPK QAAQLSTARA
NAQAALQAAE EKWLEASAAQ DAAQG
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