| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3423 |
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| Symbol | |
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| ID | 6411097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3662806 |
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| End bp | 3663513 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713303 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001992400 |
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| Protein GI | 192291795 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.324081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCGGA CGATGGATCA GAAACTCACG CGACGGGTGC ATCAGGGGCA TCTGCGGATT
TTCATCGCGG ACGATCATCC GGTGGTCTTG AGCGGAATGA AGATGCTGCT CCAAGCCGAT
CCGGAGTTCG AAGTTATCGG CGAGGCTGCG GACGGTCCGA CAGCGCTCCG TCGGGCGATC
GAACTTCAGC CAGACGTCGC GGTATTCGAT CTGTCGATGC CTGGGTTGTA CGGCATGGAG
GTCATCCAGA AGTACCTCGC AGCCCGTCCC AAGGCACGGG TCGTCGTCGT CTCGGTGCAG
GAGGATGGGG CCAATCTGCG CCGGCTGCTG AAGCTCGGCG TTGCCGGCTA CATTCTCAAG
CGATCGGCCA CCGATGAGCT GATCCGCGGC ATTCATGCGG TGGCCAAGGG CGGCGTGTAT
CTCGATCCGG CGATCGCCGG TCAGGCGCTC GGCAGGGTCG TCCATGCCGC GCCAGCGAGC
CTCGGCGAAA CCAGCCAGAT CGCGCATCTC AGCGCCCGCG AGTTGGACGT GCTCCGGCTG
GCGTCGGTCG GGCACAGCAA CAAGGTGATC TCCGCCAAGC TGCAGGTCGG GCCGAAGAGC
GTCGAGACCT ACAAGGCGCG CGCTATGGAG AAACTCGGCT TCACCAACCG CGTCGAACTG
ATCCGTTTCG CGCTGGACAT GGGCTGGCTG GAGAATTCCG GGTTGTAG
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| Protein sequence | MVRTMDQKLT RRVHQGHLRI FIADDHPVVL SGMKMLLQAD PEFEVIGEAA DGPTALRRAI
ELQPDVAVFD LSMPGLYGME VIQKYLAARP KARVVVVSVQ EDGANLRRLL KLGVAGYILK
RSATDELIRG IHAVAKGGVY LDPAIAGQAL GRVVHAAPAS LGETSQIAHL SARELDVLRL
ASVGHSNKVI SAKLQVGPKS VETYKARAME KLGFTNRVEL IRFALDMGWL ENSGL
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