Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3420 |
Symbol | |
ID | 6411094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3661250 |
End bp | 3661888 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642713300 |
Product | hypothetical protein |
Protein accession | YP_001992397 |
Protein GI | 192291792 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.625895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTTC AAGTCATTCT CTGCTACGAA ACGGTTCGCC AGGTCGCGGG ACTGGAATCT GAATTGAAGG CGAACGGATT CGATCAGGCT CAGGTTCTTC CGAATGGGAC CGTGCCGAAC CGCGGCAGCA TTGTCGATCT CACCAACGCG ATCAGTAAGC TCGGCGTTCT ACGCGCCACC GCGGCGGGCC TTGCCGGCAC CATCAGTCGA GGTGGTGCTG TTGCGCTCGT GCCTGCGCAT TTCGGAGCTG GCGGCAAGGC CACCGAAATC ATGAAGAAGT ACAATCCGAT CGTCGACAGA CCGGCTGCCA AGCCGAGTGC ATGGGACGAT GCGGCCCCGT TCTCGTCGCT GCTGCGACTG CCGGTGATTA CGAAGTCGCA GCCCTTCAAA GGACATTCAG GCACCCCGCT GATCATCGAG CAGGACGGCG CCTACCGCTC GAATTCGGGC GAGCCGTTGG TCATCAAGCA GACCGGAGGC TACCGCTCGA TGTCAGGGAC GCCTCTGCTG CTCGACGGTG GACCCTATAA GTCGTTCTCG GGAACACCTT TGTTGATCGA ACAGAAGGAC GCCTACAGTT CGTTTTCCGG CACGTCTCTG CTGGTGGACA GCAACACGCT GTTCCTGACC AGAGCCTGA
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Protein sequence | MTFQVILCYE TVRQVAGLES ELKANGFDQA QVLPNGTVPN RGSIVDLTNA ISKLGVLRAT AAGLAGTISR GGAVALVPAH FGAGGKATEI MKKYNPIVDR PAAKPSAWDD AAPFSSLLRL PVITKSQPFK GHSGTPLIIE QDGAYRSNSG EPLVIKQTGG YRSMSGTPLL LDGGPYKSFS GTPLLIEQKD AYSSFSGTSL LVDSNTLFLT RA
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