| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3408 |
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| Symbol | |
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| ID | 6411082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3647336 |
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| End bp | 3647782 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713288 |
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| Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_001992385 |
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| Protein GI | 192291780 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTCATTG GGGATATTCT GCTCCCGGCG CACGTCGTCG TGGGTTTGCG CTGCTCCGAC
AGGGCGCAGC TCATCAGCGA ACTGTCGTCG ATCGCTTCGA AGACGGTTGC CCTGTCGCAG
GGCTTGCTGT CCGGGCGGCT GCTGGAGCGC GAGCGTCTCG GCTCGACCGG CGTCGGCGAT
GGCGTAGCTA TTCCGCACGC GCGCTTCGAG GAATTAGCTC AGCCGTTCGC TCTGTTCGCC
CGACTGCAGC GGCCGATCGA TTTCGATGCG ATCGATGGCA AGCCGGTCGA CCTAGTGTTT
CTCCTGTTGT TGCCGGCGTC ATCGAGCCGC GAGCAGCTGC CGCTGTTGGC CTCGGTCGCG
CGGCATCTGC GTCAGCAGGC GATCGCCCGC GAGCTACGAG CGGCGGCGGA TGCCTCGACG
GCGTTCCAGG TGCTGACGCG TGCGTGA
|
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| Protein sequence | MVIGDILLPA HVVVGLRCSD RAQLISELSS IASKTVALSQ GLLSGRLLER ERLGSTGVGD
GVAIPHARFE ELAQPFALFA RLQRPIDFDA IDGKPVDLVF LLLLPASSSR EQLPLLASVA
RHLRQQAIAR ELRAAADAST AFQVLTRA
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