Gene Rpal_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3398 
Symbol 
ID6411072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3637076 
End bp3638056 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content70% 
IMG OID642713278 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_001992375 
Protein GI192291770 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.197357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCG TCGTCGTCGA CGACTATGCC GCGATCGATC AGGTCGCGTT GAAACAGATC 
GCGCGGCCGG CGGTCATGCC GGGATCGGTG CGGGTCCGGG TTCAGGCGGT CGGCATCGGC 
TTCGTCGACG GCCTTAAAGT GCAGGGCCGC TATCAAACCA AAGATCCGCT GCCGTTCATT 
CCCGGCACGG AATTCGCCGG CGTGATCGAC GCGGTCGGCG ACCGCGTCGC CAACTACGCG 
GCCGGGCAGA CGGTGATGGG GATGTCGCGC TCCGGTGCGC TCGCCGAATA CATCGTGGTG 
CCGGCCGAGG CGGTGGCGCC GCTGCCCGAC GGGGTCTCGC CGGAAGAAGG CGCCTCGTTC 
CGGGCCAACT ACCTCACCGC GTATTACGCG CTGGCCGAGC GCGCCAGGCT GCAGCGGGAC 
GAGATCCTGT TGGTCCTCGG CGCCGCCGGC GGCGTCGGCA CCGCCGCGAT CCAGATTGGC 
AAGCTGCTCG GCGCCCGCGT CATCGCCGGC GCGTCGACCG CTCAGAAGCG CGACTTCGCG 
CTGAAACTCG GCGCCGACGC GGTGATCGAC TACACCCAGC CGGACTGGCG CGACACCTTT 
AAGACGCTGA CCGGCGAACA CGGCGCCGAC GTGATCTTCG ATCCGATCGG CGGGCCGGTC 
GCGGTCGAAG CGTTTCGCTC GATCGCCTGG AACGGCCGGC ACATCGTGAT CGGGTTCGCT 
GCTGGCGCCA TCCCGGCGCT GCCGTTCAAT CTGCCGCTGC TGAAAGGCGG CAGCCTGCTC 
GGCGTCGACC TCGCCCAGCT GCCGCGGCGC GAACCGGATG TGCTGGCGCG CTGCACCGCG 
GAGCTGTCGC GGCTGCTCGC CACCGGCGCG CTGAAGCCGG CGATCGTCTC GGCATTTGCG 
CTGGAGGATT TCCGCGCCGC GTTCACCGCC CTCGCCGGCC GCGACGCGCT CGGCAAGGTG 
GTGGTGCGGA TCGCGCCGTA G
 
Protein sequence
MKAVVVDDYA AIDQVALKQI ARPAVMPGSV RVRVQAVGIG FVDGLKVQGR YQTKDPLPFI 
PGTEFAGVID AVGDRVANYA AGQTVMGMSR SGALAEYIVV PAEAVAPLPD GVSPEEGASF 
RANYLTAYYA LAERARLQRD EILLVLGAAG GVGTAAIQIG KLLGARVIAG ASTAQKRDFA 
LKLGADAVID YTQPDWRDTF KTLTGEHGAD VIFDPIGGPV AVEAFRSIAW NGRHIVIGFA 
AGAIPALPFN LPLLKGGSLL GVDLAQLPRR EPDVLARCTA ELSRLLATGA LKPAIVSAFA 
LEDFRAAFTA LAGRDALGKV VVRIAP