Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3324 |
Symbol | |
ID | 6410997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3582078 |
End bp | 3582977 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642713203 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_001992301 |
Protein GI | 192291696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATC CTTCTCCGAT TCCTGCGCGC GGGCGCATCG CGTCCGGCGG CCTGGTGTTC CTGACCGTCA CCACCGTGGC GTGGGGCCTG AGCTGGCCGG TCACCAAATA TCTGATCTCG CAATGGCCGC CGCTGCCGCT GCGCGGCCTC ACAGGAATCG CCGGCTCGCT GGCGCTGTTC GGCTATGCGG CGCTGCGCGG CGACAGCCTG GCGGTGCCGC GCGACCAGCG GCTGCGATTG GTGATCTCGG CGTTCTTCAA CGTCACGCTG TGGATGGCGG TGATGGGCCT GGCGCTGCTG TGGCTGCCGG CCGGCGAGAC CGCGGTGATC GCCTACACCA TGCCGGTGTG GACCGCACTA CTGGCCTGGC CGCTGCTCGG CGAGCGGCTG ACGCTGCGCC GGGTCGCGGC GCTGGCGTTG GCGTTCGGCG GCATCGCGGC GTTGATGGGC GCTGCGGGCT TCGCTGCCAG CATGACGAAG CTGCCCGGCA TCCTGCTGGC GCTGACCGGC GCGCTCGGCT TCGCGCTCGG CACCATCTTC CTGAAGCGGT TTCCGATCGC GCTGCCCGGT GCCACTTCGG CGGCGTGGCA GATCGGGCTC GGCTGCATTC CGGTCGCAGT GATCGGGCTG GCGTTCGAGA TCCCGCACGT CTCGGTGCTG ACGCCGCTCG GCTGGGCCGG GCTGGTGTAT CTGGTCGTGA TCCAGTTCTG CATCGCTTAC GTCTGCTGGT TCGCCGCGCT GCAGCGGCTG CCGGCGTCGG TCGCGGCGAT CGGTACCATG GCGACCCCGG TGATCGGCGT GGTCGCCTCG GCGGTTGCGC TGCACGAGCC GCTCGGCGTC GGCCAGATCG CCGCGCTGGT GATGACGCTG ACCGGCGTGG CGTTGGCGAC GCGGTCGTGA
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Protein sequence | MSDPSPIPAR GRIASGGLVF LTVTTVAWGL SWPVTKYLIS QWPPLPLRGL TGIAGSLALF GYAALRGDSL AVPRDQRLRL VISAFFNVTL WMAVMGLALL WLPAGETAVI AYTMPVWTAL LAWPLLGERL TLRRVAALAL AFGGIAALMG AAGFAASMTK LPGILLALTG ALGFALGTIF LKRFPIALPG ATSAAWQIGL GCIPVAVIGL AFEIPHVSVL TPLGWAGLVY LVVIQFCIAY VCWFAALQRL PASVAAIGTM ATPVIGVVAS AVALHEPLGV GQIAALVMTL TGVALATRS
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