Gene Rpal_3319 details

Gene Information

• Locus tag: Rpal_3319
• Symbol: bioD
• ID: 6410992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 3576792
• End bp: 3577430
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 642713198
• Product: dithiobiotin synthetase
• Protein accession: YP_001992296
• Protein GI: 192291691
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0132] Dethiobiotin synthetase
• TIGRFAM ID: [TIGR00347] dethiobiotin synthase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGCGC GGATCGTCGT CACCGGCACT GACACCGGCA TCGGCAAGAC CGTGTTTGCC 
GCCGCACTCG CCGGCGCGCT GGACGCCACT TATTGGAAGC CGGTGCAGTC CGGACTCGAA 
GACGAGACCG ACTCCGGCGC TGTCCAGCGG CTGTCGGGGC TCGCGGCCGA TCGGATCCTG 
CCGGAGCGCT ACCGGCTGAG GACGCCAGCC TCGCCGCATC TCGCCGCGGA GATCGACGGT 
GTCGACATCG ACGTCGCCGC GCTCGAATTG CCTTCGGTGT CGCGTCCGCT GGTGGTCGAA 
GGCGCCGGCG GACTGATGGT GCCGCTGACG CGCGAGACCA CCTACATCGA CGTGTTCGCG 
CGCTGGGCAG CGCCGCTGGT GCTATGTGCC CGCACCTCGC TCGGCACGAT CAATCACACG 
CTGCTGTCGA TCGAAGCGAT CAGGGCGCGC GACATTCCGC TGCTCGGCGT CGCCTTCCTC 
GGCGATGAGA ACCTCGACTC CGAGCAGATC ATCGTCGAAC TCGGCCATAC CCGCCGGCTC 
GGCCGGTTGC CCCGGCTGGA GCGGCTTGAT GCGGCCGCGC TGCGCGCTGC GTTCGCAGCG 
GCGTTCGAGC CTCGCGATTT TCTCGGAGAC GCGCCATGA 

 

Protein sequence

MSARIVVTGT DTGIGKTVFA AALAGALDAT YWKPVQSGLE DETDSGAVQR LSGLAADRIL 
PERYRLRTPA SPHLAAEIDG VDIDVAALEL PSVSRPLVVE GAGGLMVPLT RETTYIDVFA 
RWAAPLVLCA RTSLGTINHT LLSIEAIRAR DIPLLGVAFL GDENLDSEQI IVELGHTRRL 
GRLPRLERLD AAALRAAFAA AFEPRDFLGD AP