| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3318 |
|---|
| Symbol | |
|---|
| ID | 6410991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3575518 |
|---|
| End bp | 3576795 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642713197 |
|---|
| Product | adenosylmethionine--8-amino-7-oxononanoate transaminase |
|---|
| Protein accession | YP_001992295 |
|---|
| Protein GI | 192291690 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACG CCTCGCCGGT CTGGCATCCG TTCACTCAGC ACGCGGTGCA GGGCGACACC
CCGACCATCG TGCACAGCGA AGGCGCCTGG CTTCAAGCCG ATGACGGGCG GCGGATCTTC
GATGCGATCA GCTCGTGGTG GGTGGTGACG CATGGTCATC GCCATCCGAC GATCATCTCG
GCGATCAAGC AGCAGGCCGA CCAGCTCGAT CAGATCATCT TTGCCGGCTT CACCCATCCG
CCGGCCGAAC AGCTGGCGCA GCGCCTGGTC GAGATCACGC CGCCCGAGCT GACGCACGTG
TTCTTCTCCG ACAGCGGCTC GACCTCTGTC GAGGTCGGCC TCAAGATGGC ACTCGGCTAT
TGGCTGCATT CCGGCGAGAG CCGGCGGCGT ATTCTGGCGC TGGAAGGCGC GTATCATGGC
GACACCATCG GCGGCATGTC GGTGGGTGAG CGCGGCGTGT TCAATGCGCC GTATGACCCG
CTGCTGTTCG ATGTCAGCCG GCTGCCGTTT CCGCGTGCGG GCGCCGAGCA GGCAACGCTC
GACGCGCTGG AGCAGGCGTG CCGTGCCGAG GCGGTGGCGG CGCTGATCGT CGAGCCGCTG
GTGCTCGGCG CAGGCGGCAT GCTGATCTAT CCGCCCTGGG TGCTCGCCGA GATGGCGCGG
ATCTGCGAGG CGCACGGCGT GCTGCTGATC GCCGACGAAG TGATGACCGG CTGGGGCCGT
ACCGGCACGC TGTTCGCGTG CGAGCAAGCG AATATCGTGC CCGACATCGC CTGCTACTCG
AAGGGCCTGA CCGGCGGCTC GGTGCCGCTC GCGGTGACGA TGTGCCGGCG CGAGATCTTC
GACGCGCATT TCTCGACCGA CCGGCGCAAG ACGTTCTTTC ACTCCAGCTC CTACACCGCC
AACCCGATCG CCTGCGCTGC GGCGCTGGCC AATCTTCAGG TGTGGGCGAG CGAGCCGGTA
CGGCAACGGA TCGACGATCT GGCGGCCGTC CACGCTTGCG CGCTGGATCG TTTCAGGGAC
GATACGCGCT TCGCCAACGT CCGACAGATC GGCACCATCG CGGCGGTCGA TCTGCAGGTC
GGCGACAGCG GCTATCTGGC CGACGTCGGG CCGCGGCTGT ACGCATACTT CATCAATCGC
GGTCTGTTGG TCCGCCCGCT CGGCAACACG ATCTATCTGA TGCCGCCGTA TTGCAGCACG
GCGGCGGAGA TCGAGGCGGT GTATGAGGCG ATCGCTGCGG CACCCGAGGT GCTGGCGCGT
GGGAGCGATG CGGGTTGA
|
|---|
| Protein sequence | MSHASPVWHP FTQHAVQGDT PTIVHSEGAW LQADDGRRIF DAISSWWVVT HGHRHPTIIS
AIKQQADQLD QIIFAGFTHP PAEQLAQRLV EITPPELTHV FFSDSGSTSV EVGLKMALGY
WLHSGESRRR ILALEGAYHG DTIGGMSVGE RGVFNAPYDP LLFDVSRLPF PRAGAEQATL
DALEQACRAE AVAALIVEPL VLGAGGMLIY PPWVLAEMAR ICEAHGVLLI ADEVMTGWGR
TGTLFACEQA NIVPDIACYS KGLTGGSVPL AVTMCRREIF DAHFSTDRRK TFFHSSSYTA
NPIACAAALA NLQVWASEPV RQRIDDLAAV HACALDRFRD DTRFANVRQI GTIAAVDLQV
GDSGYLADVG PRLYAYFINR GLLVRPLGNT IYLMPPYCST AAEIEAVYEA IAAAPEVLAR
GSDAG
|
|---|
| |