| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3307 |
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| Symbol | |
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| ID | 6410979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3560999 |
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| End bp | 3563431 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713185 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001992284 |
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| Protein GI | 192291679 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA CCAAACCCAG GCCATCGATC ACCTACGGCG AAAGCCACTC CTATCCGGTT
CTTCCACTGC GCGACATCGT CGTGTTTCCG CACATGATCG TGCCGCTGTT CGTCGGTCGC
GAGAAGTCGA TCCGCGCCCT CGAAGAGGTG ATGAAGAACG ACGCGCTGAT CATGCTGGCG
ACGCAGAAGA ACGCGTCCGA TGACGACCCG GCTCCCGATG CGATCTACGA GATCGGCACG
CTGGCCAGCG TTCTGCAGCT GCTGAAATTG CCCGACGGCA CCGTGAAGGT GCTGGTCGAA
GGCCTCGCGC GCGCCAAGGT CGACAAGTAC ACCGATCGCG CCGATTACTA CGAGGCCGAC
GCCGTCGCGC TCGAAGACAG CGATGCCACC TCGGTGGAAG CCGAGGCGCT GGGCCGCTCG
GTCGTGTCCG ACTTCGAGAG CTATGTGAAG CTCAACAAGA AGATCTCGGC CGAAGTCGTC
GGCGTGGTGC AGTCGATCAC CGACTTCGCC AAGCTCGCAG ACACCGTCGC CTCGCATCTC
GCTGTCAAGA TCGCCGACCG CCAGGGTATC CTGGAGACGC TGTCGGTGAC GCAGCGGCTG
GAGAAGGTGC TCGGCCTGAT GGAGAGCGAG ATCTCGGTCT TGCAGGTCGA GAAGCGCATC
CGCTCGCGCG TCAAGCGCCA GATGGAGAAG ACCCAGCGCG AGTACTATCT CAACGAGCAG
ATGAAGGCGA TCCAGAAGGA GCTCGGCGAC GAAGACGGCC GGGACGAACT CGCCGAACTC
GAAGAGAAGA TCGCCAAGAC CAAGCTCTCC AAGGAAGCGC GGGAGAAGGC GCAGCACGAA
CTGAAGAAAC TGCGCCAGAT GTCGCCGATG TCCGCGGAAG CGACCGTCGT GCGCAACTAT
CTCGACTGGC TGCTGTCGAT CCCGTGGAAC AAGAAGTCCA AGGTGAAGAA GGATCTGGAA
GCGGCTCAGG CCGTGCTGGA TTCCGATCAC TACGGGCTCG AGAAGGTCAA GGAGCGGATC
GTCGAGTATC TCGCGGTGCA GTCGCGCGCC AACAAGCTGT CGGGCCCGAT CCTCTGCCTC
GTCGGGCCGC CCGGCGTCGG CAAGACCTCG CTCGGCAAGT CGATCGCCAA GGCCACGGGA
CGCGAGTTCG TCCGCGTGTC GCTCGGCGGC GTGCGTGACG AAGCAGAGAT CCGCGGTCAC
CGCCGCACTT ACATCGGCTC GATGCCCGGC AAGATCATCC AGTCGATGCG GAAGGCGAAG
ACTTCGAATC CGCTGTTCCT GCTCGATGAG ATCGACAAGA TGGGCGCCGA TTTCCGCGGC
GATCCGTCAT CGGCTCTGCT CGAGGTGCTC GACCCCGAGC AGAACGGCAC CTTCAACGAC
CACTATCTCG AGGTGGACTA CGATCTGTCC AACGTGATGT TCATCACCAC GGCGAACACC
CTGAACATTC CGGGGCCGCT GATGGATCGT ATGGAGATCA TCCGGATCGC CGGCTACACC
GAGACCGAGA AGGTCGAGAT CGCACGCAAG CACCTGATCC CGCTGGCGCT GACCAAGCAC
GGCCTGGAGC CGAAGGAGTG GTCGATCGAC GACGACGCGT TGTTGCTCGT CATCCGCCGC
TACACCCGCG AGGCCGGCGT CCGCAACCTC GAGCGCGAGA TCTCTACCCT CGCGCGGAAG
GTGGTGAAGG ACCTGATGCT GTCGAAGAAG AAGTCGGTCC ACATCGACGA GAAGCAGATC
GAAGAATATC TCGGCGTGCC GAAGTTCCGC TTCGGCGAAA TCGAGAAGGA CGATCAGGTC
GGTGTGGTCA CGGGTCTGGC GTGGACGGAT GTCGGCGGCG AGCTGCTGAC GATCGAAAGC
GTGATGATGC CGGGCAAGGG CCGGATGACG GTTACCGGCA ACTTGCGCGA CGTCATGAAG
GAATCGATCC AGGCGGCGGC GTCCTATGTC CGCAGCCGCG CGATCACCTT CGGCATCGAG
CCGCCGTTCT TCGAGAAGCG CGACATCCAC GTCCACGTGC CGGAGGGGGC GACCCCGAAG
GACGGCCCCT CGGCCGGCGT GGCGATGGCG ACCACCATCG TGTCGGTGCT GACCGGAATC
CCGATCCGCC GCGATATCGC CATGACCGGC GAGATCACGC TGCGTGGCCG GGTGCTGCCG
ATCGGCGGCC TCAAGGAGAA GCTGCTCGCC GCGGCCCGCG GCGGCATCAA GACGGTGCTG
ATCCCGGAAG ATAATGCCAA GGACCTCACC GAGATCTCGG ACGCGATCAA GGGTGGTTTG
AACATCATCC CGGTGGCGCG GATGGACGAG GTGATCGCCA ACGCGCTGAC CCGCGCGCCG
GTGCCGATCG TCTGGGAAGA GGAAACCAAG CTGCCCGGCA CCCCGGACAG CGCCGAAGCC
GACGAAGCCG GCGGCGGCCT GACCGCCCAC TAA
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| Protein sequence | MTATKPRPSI TYGESHSYPV LPLRDIVVFP HMIVPLFVGR EKSIRALEEV MKNDALIMLA
TQKNASDDDP APDAIYEIGT LASVLQLLKL PDGTVKVLVE GLARAKVDKY TDRADYYEAD
AVALEDSDAT SVEAEALGRS VVSDFESYVK LNKKISAEVV GVVQSITDFA KLADTVASHL
AVKIADRQGI LETLSVTQRL EKVLGLMESE ISVLQVEKRI RSRVKRQMEK TQREYYLNEQ
MKAIQKELGD EDGRDELAEL EEKIAKTKLS KEAREKAQHE LKKLRQMSPM SAEATVVRNY
LDWLLSIPWN KKSKVKKDLE AAQAVLDSDH YGLEKVKERI VEYLAVQSRA NKLSGPILCL
VGPPGVGKTS LGKSIAKATG REFVRVSLGG VRDEAEIRGH RRTYIGSMPG KIIQSMRKAK
TSNPLFLLDE IDKMGADFRG DPSSALLEVL DPEQNGTFND HYLEVDYDLS NVMFITTANT
LNIPGPLMDR MEIIRIAGYT ETEKVEIARK HLIPLALTKH GLEPKEWSID DDALLLVIRR
YTREAGVRNL EREISTLARK VVKDLMLSKK KSVHIDEKQI EEYLGVPKFR FGEIEKDDQV
GVVTGLAWTD VGGELLTIES VMMPGKGRMT VTGNLRDVMK ESIQAAASYV RSRAITFGIE
PPFFEKRDIH VHVPEGATPK DGPSAGVAMA TTIVSVLTGI PIRRDIAMTG EITLRGRVLP
IGGLKEKLLA AARGGIKTVL IPEDNAKDLT EISDAIKGGL NIIPVARMDE VIANALTRAP
VPIVWEEETK LPGTPDSAEA DEAGGGLTAH
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