Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3259 |
Symbol | lpxD |
ID | 6410929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3504525 |
End bp | 3505607 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642713135 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001992236 |
Protein GI | 192291631 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCATCCA CGTCGTTTTT CCCGCCGCGT CCTTCGTCGA CCCTGGCCGA GATCGCCAGC CTGACGAAAG CAACGCTGGT TGATGCTTCG TACGCGGAGC ATCGCATCAC TGGACTGGCC TCGCTCGACG AGGCCGGCCC AATGCACTTG AGCTTTTTCG AGAATCTCCG CTACTCGGAT GAACTCGCGA ACACGCGAGC GGGCGCTTGC CTTGTTAGCG AGCGGTTCGA GGGCAGGGTG CCCTCACACG TTGCTGTGCT GCGCGCCCGT CGTCCGTTCC ACGCCTTCGT GGCCTACGCC CGGCATCTGT ATTCCGATGC GTTGCGTCCG CACACCGGAA TTGGAGCGCC CGGCATCGCG CCGACGGCGG TGATCCACGA GACCGCCAAG CTGGAAGACG AGGTCACGGT CGAGCCGCTG GCGGTGATCG GCCCCGACGT CGAGATCGGC TCCGGCACGG TGATCGGGGC GGGCGCGGTG ATCGCTGCCG GTGTCAAGAT CGGTCGCGAC TGCGATATCG GTGCCGGCAG CCATCTGCAG CACGCGCTGA TCGGCAACAA CGTGCTGATG CATCCGGGCT GCCATATCGG CCAGGACGGC TTCGGCTTCA TTTTCGCCGG TCAGCACACC AAGGTGCCAC AGACCGGCCG GGTGATCATT CAGCACGACG TCGAGCTCGG CGCCGGCACC ACCATCGACC GCGGCTCGCT GCGTGACACG GTGATCGGCG AGGGCACCAA GATCGACAAT CAGGTTCAGA TCGGCCACAA CGTAACAATT GGTCGACATT GCGTGATCGC CGCCAAATGC GGTCTTGCCG GCAGCCTGAC GCTGGGCGAC AACGTCGCGC TCGGCGCCAT GGTCGGCATC AACAATCATG TGATGATCGG CGACGGCGCC CAGGTGGCGG CGATGTCCGG GGTGAAGGAT AGTATTCCCG CGGGTGAGCG CTGGGGCGGC ATCTTCGCGC GGCCGACCAG AACATGGTTC CGGGAAATGC TCGCGGTACG GCGGCTCGCT GAAGGCAGCG GAGCCGAGAC GGCGGCAAGA CCCGACGACG ACAGGGATGA AGGACGGGGG TGA
|
Protein sequence | MASTSFFPPR PSSTLAEIAS LTKATLVDAS YAEHRITGLA SLDEAGPMHL SFFENLRYSD ELANTRAGAC LVSERFEGRV PSHVAVLRAR RPFHAFVAYA RHLYSDALRP HTGIGAPGIA PTAVIHETAK LEDEVTVEPL AVIGPDVEIG SGTVIGAGAV IAAGVKIGRD CDIGAGSHLQ HALIGNNVLM HPGCHIGQDG FGFIFAGQHT KVPQTGRVII QHDVELGAGT TIDRGSLRDT VIGEGTKIDN QVQIGHNVTI GRHCVIAAKC GLAGSLTLGD NVALGAMVGI NNHVMIGDGA QVAAMSGVKD SIPAGERWGG IFARPTRTWF REMLAVRRLA EGSGAETAAR PDDDRDEGRG
|
| |