Gene Rpal_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3259 
SymbollpxD 
ID6410929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3504525 
End bp3505607 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content65% 
IMG OID642713135 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_001992236 
Protein GI192291631 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCCA CGTCGTTTTT CCCGCCGCGT CCTTCGTCGA CCCTGGCCGA GATCGCCAGC 
CTGACGAAAG CAACGCTGGT TGATGCTTCG TACGCGGAGC ATCGCATCAC TGGACTGGCC
TCGCTCGACG AGGCCGGCCC AATGCACTTG AGCTTTTTCG AGAATCTCCG CTACTCGGAT
GAACTCGCGA ACACGCGAGC GGGCGCTTGC CTTGTTAGCG AGCGGTTCGA GGGCAGGGTG
CCCTCACACG TTGCTGTGCT GCGCGCCCGT CGTCCGTTCC ACGCCTTCGT GGCCTACGCC
CGGCATCTGT ATTCCGATGC GTTGCGTCCG CACACCGGAA TTGGAGCGCC CGGCATCGCG
CCGACGGCGG TGATCCACGA GACCGCCAAG CTGGAAGACG AGGTCACGGT CGAGCCGCTG
GCGGTGATCG GCCCCGACGT CGAGATCGGC TCCGGCACGG TGATCGGGGC GGGCGCGGTG
ATCGCTGCCG GTGTCAAGAT CGGTCGCGAC TGCGATATCG GTGCCGGCAG CCATCTGCAG
CACGCGCTGA TCGGCAACAA CGTGCTGATG CATCCGGGCT GCCATATCGG CCAGGACGGC
TTCGGCTTCA TTTTCGCCGG TCAGCACACC AAGGTGCCAC AGACCGGCCG GGTGATCATT
CAGCACGACG TCGAGCTCGG CGCCGGCACC ACCATCGACC GCGGCTCGCT GCGTGACACG
GTGATCGGCG AGGGCACCAA GATCGACAAT CAGGTTCAGA TCGGCCACAA CGTAACAATT
GGTCGACATT GCGTGATCGC CGCCAAATGC GGTCTTGCCG GCAGCCTGAC GCTGGGCGAC
AACGTCGCGC TCGGCGCCAT GGTCGGCATC AACAATCATG TGATGATCGG CGACGGCGCC
CAGGTGGCGG CGATGTCCGG GGTGAAGGAT AGTATTCCCG CGGGTGAGCG CTGGGGCGGC
ATCTTCGCGC GGCCGACCAG AACATGGTTC CGGGAAATGC TCGCGGTACG GCGGCTCGCT
GAAGGCAGCG GAGCCGAGAC GGCGGCAAGA CCCGACGACG ACAGGGATGA AGGACGGGGG
TGA
 
Protein sequence
MASTSFFPPR PSSTLAEIAS LTKATLVDAS YAEHRITGLA SLDEAGPMHL SFFENLRYSD 
ELANTRAGAC LVSERFEGRV PSHVAVLRAR RPFHAFVAYA RHLYSDALRP HTGIGAPGIA
PTAVIHETAK LEDEVTVEPL AVIGPDVEIG SGTVIGAGAV IAAGVKIGRD CDIGAGSHLQ
HALIGNNVLM HPGCHIGQDG FGFIFAGQHT KVPQTGRVII QHDVELGAGT TIDRGSLRDT
VIGEGTKIDN QVQIGHNVTI GRHCVIAAKC GLAGSLTLGD NVALGAMVGI NNHVMIGDGA
QVAAMSGVKD SIPAGERWGG IFARPTRTWF REMLAVRRLA EGSGAETAAR PDDDRDEGRG