Gene Rpal_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3217 
Symbol 
ID6410887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3464823 
End bp3465299 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID642713094 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_001992195 
Protein GI192291590 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.21838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAA CACCCCGCAA ATCCGCCGCC TCCCCGTCCC TGCAGCTCGG CCAGGCCGTC 
GAATGGCCCG ACCGGCCGGA AGCCGCCAAG CTCGACCGGG TGCCGAACCC GCAGAAGGAC 
ACCCATTTCC TGGCGCGCTT CACCGCGCCG GAATTCACCT CGCTGTGCCC GGTGACCGGC 
CAGCCGGACT TCGCGCATCT GGTGATCGAT TACGTTCCCG GCCCGTGGCT CTTGGAGTCG 
AAGTCGCTGA AGCTGTACCT CGCCTCCTTC CGCAACCACG GCGCTTTCCA CGAAGACTGC 
ACCGTGGCGA TCGGCAAGCG GATCGCCACC GAAATCAAAC CGAAATGGCT GCGCATCGGC 
GGCTACTGGT ATCCGCGCGG CGGCATCCCG ATCGACGTAT TCTGGCAGAC CGGCAAACTG 
CCGAAGGACG TCTGGGTACC GGACCAGGGC GTACAGCCGT ATCGTGGGCG GGGTTAG
 
Protein sequence
MSKTPRKSAA SPSLQLGQAV EWPDRPEAAK LDRVPNPQKD THFLARFTAP EFTSLCPVTG 
QPDFAHLVID YVPGPWLLES KSLKLYLASF RNHGAFHEDC TVAIGKRIAT EIKPKWLRIG 
GYWYPRGGIP IDVFWQTGKL PKDVWVPDQG VQPYRGRG