| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3185 |
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| Symbol | |
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| ID | 6410855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3432310 |
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| End bp | 3433614 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713062 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001992163 |
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| Protein GI | 192291558 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.154347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGACA TCAAAGCGAT CCGCGACAAT CCGCAGGCCT TCGACGCGGC GTTCACGAGG
CGCGGTCTGG CGCCGATCGC AGGTAGCCTG ATGAAGCTCG ACGAAGTCCG CCGCGCGGCG
GTGCAGGCCG CCGAGCAGGC GCAGGCGCGG CGTAATGCGG CGTCGAAAGA GATCGGCGAC
GCCAAGAAGG CCAAGGACAA CGCCCGCGCC GAGGCGCTGA TGGCCGAGGT CACCGAACTA
AAGACCACGA TGCCGGCGCT CGACGCGGCG GTGAAGGAAG CCGACGAGGC GCTGAAAAAG
GCGCTGTCGG AAATCCCGAA CCTGCCGCTG CCAGAGGTGC CGGAAGGCGC CGACGAACAC
GGCAACGTCG AGCACCACCG CTTCGGCGAA AAGCCGAGCT ACAGTTTCAC GCCGAAGCCA
CATTACGACC TCGGCGAAGC GCTCGGCATG ATGGACTTCG AAGCCGCGGC CAAACTCTCC
GGCGCGCGCT TCACCGTGCT GAAGAAGGGC CTCGCGCGGC TCGAACGCGC GATCGGTCAG
TTTTTCCTCG ACGTCCACAC CGGCGACCAC GGCTACACCG AAGTCAATCC GCCGCTGCTG
GTGAAGGACG ACGCGATGTT CGGTACCGCT CAGCTGCCGA AGTTTCGCGA GGATCAGTTC
GCGGCCGGAG CGATTGGCAG CGGTGGCGAG GGTTACTGGC TGATCCCCAC CGCCGAAGTC
TCACTGACCA ATCTCGTTCG CGAGTCCATC CTCGACGAGA AGGAGCTGCC GATGCGCCTC
ACAGCGTTGA CGCCGTGCTT CCGCGCTGAG GCGGGCGCTG CGGGGCGTGA TACCCGCGGC
ATGATCCGGC AGCATCAGTT CACCAAGGTC GAGCTGGTGT CGATCACGAC GCCCGAGCAG
AGCAAGGACG AGCACGAGCG GATGCTGTCC TGCGCCGAGG AAGTGCTGCG CCGGCTCGGG
CTGCATTACC GGGTGATGAC GCTGTGCACC GGCGACATGG GCTTTGCGTC GCAGAAGACT
TACGACATCG AAGTCTGGAT GCCGGGGCAG GGCGAGGGCG GTGCGTACCG CGAAATCTCC
TCGTGCTCGG TGTGCGGCGA CTTCCAGGCC CGCCGCATGG ACGCGCGCTC GCGCGGTTCG
GACGGCAAGC CGCGTTTCGT CCACACGCTG AACGGCTCCG GTACCGCCGT CGGCCGTGCG
CTGATCGCGG TGATCGAGAA CTATCAGCAG GAAGACGGCT CGATCGCCGT CCCCGACGTG
CTGCAGCCCT ACATGGGCGG GCTGAAGGTG ATCGCGAAGG CGTAA
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| Protein sequence | MHDIKAIRDN PQAFDAAFTR RGLAPIAGSL MKLDEVRRAA VQAAEQAQAR RNAASKEIGD
AKKAKDNARA EALMAEVTEL KTTMPALDAA VKEADEALKK ALSEIPNLPL PEVPEGADEH
GNVEHHRFGE KPSYSFTPKP HYDLGEALGM MDFEAAAKLS GARFTVLKKG LARLERAIGQ
FFLDVHTGDH GYTEVNPPLL VKDDAMFGTA QLPKFREDQF AAGAIGSGGE GYWLIPTAEV
SLTNLVRESI LDEKELPMRL TALTPCFRAE AGAAGRDTRG MIRQHQFTKV ELVSITTPEQ
SKDEHERMLS CAEEVLRRLG LHYRVMTLCT GDMGFASQKT YDIEVWMPGQ GEGGAYREIS
SCSVCGDFQA RRMDARSRGS DGKPRFVHTL NGSGTAVGRA LIAVIENYQQ EDGSIAVPDV
LQPYMGGLKV IAKA
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