| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3178 |
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| Symbol | |
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| ID | 6410848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3424716 |
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| End bp | 3426131 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713056 |
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| Product | Peptidase M23 |
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| Protein accession | YP_001992157 |
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| Protein GI | 192291552 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0130239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGCG TTGCCGCGTT GCTTTGCTCG CGCCGCGCCC CGCAAATGGC GGTGCTGGCG
TTGATGTCTG TCGGTTTCAG TGCGTGCAGC TCCGACATGC AGACACGCTT CCAACAGGCC
CCGTTCGGGC CGGTTGAGAC CACAGGCTCG GTGGCGCCCC AGCATCAGCG CCAGGAGCTG
CCGCAATACG CGCGGCCCCA GTATCAGCCC CAGCCGCAAT ACCAGTCGCA GGCACTGCCG
CCGATCGCGT CGCCGTCATC CTACCCGGTG GCAAATGGGG GCGGGGGCTT CTCCGGCGGA
GGGCGCGGTG TCGGGTCCTA TGAACCGCCG CCGCGTGCGC CGATCGATCA GACCGGCACC
GTTCAGGCGA CGCGCTCGGT CGCTGCGGCC CGGCCGATGC CGGCTGCTCC CGCAGCCGCT
GCACCGGTCC ATGCGCCCGG CACGACGATC ATCGTCGGCA CGAGCGATAC GCTGGAAATC
CTGGCGCAGC GCTACAACGT TTCGACCGCC GAGATCCTGC GCGCTAACGG CTACAAGGGC
CCGCGCCGGC TGCAGCCCGG CCAGCAGCTT GTGATCCCGA GCCGTGCCAC TGCGACCGCC
CAGGTGGCAG CTCCGGTCGC CGCGCCGATG TCCGCTCCGC CGGCTCCGCG TCCGGTTGCG
ACCGCTGCGC CGGCCCCAGC GCGCGTGCAC TACGTCAACA ACGGCGACAC GCTGATGAAC
ATTGCGCGCC GCAACAACAT CTCGCTCGGC GAGCTGGCGC GCTACAACAA CCTCACCACC
ACCACGAAGC TGAAGCCGGG CATGAAGATC AACGTGCCGG GCGCCCAGGT CGCGGGTCTC
GCGCCGGCAC AGCCCCCGAT CCAGGCGCCG GCCGCCGCCC CGATGGCGGC TCCGCAGGTG
CGGATGGCCA ACGTCGCTCC GACGGTCCCG GCCGAGCCGC CGCAGAAGGC GCGGATGGTG
GCGCCGACCG AGACTCCCGA AGCTGCTGCG CCGGCCGAAG CGGCACCGGT GAAGTCGGCC
GAAGCAACTG GAGCGCTGCC GAGCTTCCGC TGGCCGGCCC GCGGCCGGGT GATCGCGGCC
TACGGCGCCA AGACCAACGG CAAGTCCAAC GACGGCATCA ACCTGTCGGT GCCGGAAGGC
ACGCCGGTGA AGGCCGCCGA AGACGGCGTC GTCGCCTACG CCGGCAGCGA ACTGAAGGGC
TACGGCAATC TGGTGCTGAT CCGCCACTCC AACGGTTACG TCTCGGCTTA CGCTCACGCC
AGCGAGCTGA TGGTGAAGCG CGGCGAGACT ATCAAGCGCG GCCAGGTAAT CGCCAAGTCG
GGCCAGAGCG GCGAGGTGTC TTCACCGCAG CTGCACTTCG AGATCCGCAA GGGATCGACC
CCGGTCGACC CGCTGAAGTT CCTCAACGGC GCCTGA
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| Protein sequence | MSRVAALLCS RRAPQMAVLA LMSVGFSACS SDMQTRFQQA PFGPVETTGS VAPQHQRQEL
PQYARPQYQP QPQYQSQALP PIASPSSYPV ANGGGGFSGG GRGVGSYEPP PRAPIDQTGT
VQATRSVAAA RPMPAAPAAA APVHAPGTTI IVGTSDTLEI LAQRYNVSTA EILRANGYKG
PRRLQPGQQL VIPSRATATA QVAAPVAAPM SAPPAPRPVA TAAPAPARVH YVNNGDTLMN
IARRNNISLG ELARYNNLTT TTKLKPGMKI NVPGAQVAGL APAQPPIQAP AAAPMAAPQV
RMANVAPTVP AEPPQKARMV APTETPEAAA PAEAAPVKSA EATGALPSFR WPARGRVIAA
YGAKTNGKSN DGINLSVPEG TPVKAAEDGV VAYAGSELKG YGNLVLIRHS NGYVSAYAHA
SELMVKRGET IKRGQVIAKS GQSGEVSSPQ LHFEIRKGST PVDPLKFLNG A
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