| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3136 |
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| Symbol | |
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| ID | 6410807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3382677 |
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| End bp | 3384167 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713016 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001992117 |
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| Protein GI | 192291512 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCAAGC ACTCGCAGCT CGAATCCGTC AAAGCCTGGG TGGCGCATCC GGCGCACGCG
GCGATGCCGT TACACGCACG GGTTCAGCGT GCCATCCGCC AACTGATCGT CGACGGTGCG
CTGGGTGCAG GCAAGCCGCT GCCCGCCTCG CGTGCGCTTG CTCAATCGCT TGGCGTGTCG
CGCGATACGA TCGAGGTCGC CTATGGTCAG CTCCATGCTG AGGGCTTCAT CGAGCGGCGT
GTGGGCAGCG GTAGCTTCGT CGCGGAGATG ACGGAATTCG CGCCGGGCCG CCGCCTGTCG
CAGCGCGACG CGCTGCTCCG CAGCCAGGCG CCGAAGCTCA GCAAGCGCGG GACCGCGATG
TTCGGCAGCG GCGGCATTCG CGAGCAGTTG TTGCCGAGGC CGTTCGTCCA CGGTGTGCCG
GAAACGCGGA CGTTTCCGCT TCCGCTGTGG GAGCGACTGG AACGCCAAGT CCGCAAGGAG
CTTGGCGCGC AGACCCTGCT ACACTGCGAT CCGCAGGGCA CCGAGCCGCT ACGCCGCGCC
ATTGCCGACT ACGTCAACCT CGAACGCGGC GCCCGCGCCG CGGCGGACCG GGTTCTGGTG
CTCACCAGTT CGCAGCAGGC GCTGTCGCTG TGCGCGAATA TGCTGCTCGA TCCCGGCGAT
CGTGTCTTCA TCGAAGATCC AGCCTATTAC GGCGCGCGCA AAGCGTTCGA TGCCGCAGGT
CTGGAGTGCG TTCCGATTCC GGTCGACCGT CAGGGCCTCG TCGTCGACCA GATCACGGCC
CAGCCGCGCC GGGCCAAGGC GGTGTTCCTC ACGCCCTCTC ACCAGTTTCC GACCGGCGCG
ACGCTGGCGC TGGATCGCCG CCTCGCATTG ATCGAATGGG CGGCGCGACA TCAGACCTGG
ATCATCGAAG ACGATTACGA CAGCGAATTC CACTACGCCG GCAAGCCGAC GGCTTGCGTG
CAAGGTCTCG ATCCGCACGA CCGGACCGTC TACATTGGGA CCTTCACCAA ATCGCTGTTT
CCGGGCTTGA GGATCGGCTA CGTCGTCTTG CCGCCGCAGC TCGTGAAGCC GATGACGGTC
GCGCGCACGC TGCTGGATGG TCACAGCGCC TCGATGGCGC AACTGACGCT GGCCCGGTTC
ATGGAGGGCG GACATTTCGG CGCGCATGTT CGCACGATGC GCGGCGTCTA TGCGCAGCGC
CTGGATGTCC TCGTCCGCCT CGTCCGCAAA TATCTGTCTG GATTGGTCGA GCCGCGCGTT
CCGGTCGGCG GCCTGCAACT GCCCTGCGTA CTGACCTGCG ACCTTGCGGA GCGTACCGCC
GTCGACGCCG CGCAGCGTGT CGGGATCGAG TTGCTCGGTC TGTCTGGATT GCAGCACGCG
CGCCACGGGG AGGCCGGCTT CCTGATGGGC TTTGCTGCGT ACACGCCGCT CGAGATCGAA
GGCGCCGTGA AGAAGCTGGC CAAAGCGCTT CGGGCGGCTG CGAAATCATA A
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| Protein sequence | MFKHSQLESV KAWVAHPAHA AMPLHARVQR AIRQLIVDGA LGAGKPLPAS RALAQSLGVS
RDTIEVAYGQ LHAEGFIERR VGSGSFVAEM TEFAPGRRLS QRDALLRSQA PKLSKRGTAM
FGSGGIREQL LPRPFVHGVP ETRTFPLPLW ERLERQVRKE LGAQTLLHCD PQGTEPLRRA
IADYVNLERG ARAAADRVLV LTSSQQALSL CANMLLDPGD RVFIEDPAYY GARKAFDAAG
LECVPIPVDR QGLVVDQITA QPRRAKAVFL TPSHQFPTGA TLALDRRLAL IEWAARHQTW
IIEDDYDSEF HYAGKPTACV QGLDPHDRTV YIGTFTKSLF PGLRIGYVVL PPQLVKPMTV
ARTLLDGHSA SMAQLTLARF MEGGHFGAHV RTMRGVYAQR LDVLVRLVRK YLSGLVEPRV
PVGGLQLPCV LTCDLAERTA VDAAQRVGIE LLGLSGLQHA RHGEAGFLMG FAAYTPLEIE
GAVKKLAKAL RAAAKS
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