Gene Rpal_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3123 
Symbol 
ID6410794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3369640 
End bp3370977 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content63% 
IMG OID642713003 
ProductFerric reductase domain protein transmembrane component domain 
Protein accessionYP_001992104 
Protein GI192291499 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4097] Predicted ferric reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCG TGAGATTGAA GGTGGCGTTC GCCGGGGTAA TCGGTGGTCT GTCGGGCCTG 
TGGCTCCTCA GCCTGGCCCC CGACGCATGG CAGCAAGGTT TCTGGGAGAC CCGCGCGACG
CTGGTCTATG GCTGCGGCGT GCTCGCGCTG GGGCTGATGT CCGTCGGCGT GATCCTGGCC
GCCCGGCCGG TTTGGTTCGA AACGCCGCTG GGAGGCCTCG ACAAGTTCTA TCGCCTACAT
CGATGGCTGG GGATTTCGGC GCTGGGATTT GCGCTGGTGC ACTGGCTGCT GCGCGAGGGG
CCGTCCTGGA TCACGGAGCT CGGTCTGGTC GCGCTCCCGC CGAAGCCGGC GCACCCGCAA
GAAGACGCAG CCCTGGGCTT CGATCTGTTT CGTGATCTGA AGCATCCCGC CGCCGAGGTC
GGTGAATGGG CGCTCTATGC CCTCGTCGTC CTGGTTGCGA TAGCCTTGTG GAAACGGTTT
CCCTACAAAT ACTTCTTCTG GACGCATCGG TTGATGCCGC TCGTCTATCT GGCGCTGGTG
TTTCACGCCT TCATTCTGAT CGACAAGAGC TACTGGACCA AGCCGCTCGG GCCGGTGCTG
GCGTGTCTGT TGATCGCCGG GACGGTCGCC GCCGTGATTG CGCTGTTTCG ACGGATCGGC
AGTTCACGAA AGGCATCGGG TACGATCGCG ACGCTGTCGC TTTACGACGA CAATCAAATG
CTCGAGGTCG GCGTCCGGCT CGAAACGGCA TGGCGTGGCC ACGAGGCCGG TCAGTTCGCC
TTCGTGGATT TCGACGACGC CGAGGCTGCG CATCCCTTCA CGATCTCGTC CTCCTGGCAA
AATGAAGGGC TGTTGATGTT CTCGATCAAG GGACTCGGCG ACTACACGCG AAGCCTGGCG
GGCAGCCTGC ATGTGGGGCA GGGCGTCGTT GTCGAGGGGC CGTATGGCCG GTTCAATTTT
GAGGACGACA GCGGCCGGCA GATCTGGATC GGCGGCGGCG TGGGCGTCAC GCCGTTCATC
GCCCGGCTGA AGCAACTGGT GGGAGGCGGG CAGTCCAATC CGGTTGATTT GTTCTACGCC
ACCGATACGC CCGACCCCGG CTTTGTCGCT CCGATCGCGC AACTGGCCCG CCAGTCGGGG
ATCGCTTTTC ATGTCGTGGA CGGATCGCAA GGCGACCGCC TGACGCTTGA AAAACTCGCG
GCCCTGGTGC CCGAATGGAA GCAAGCGGAC GTCTGGTTTT GTGGCCCAAG CGGATTTGGT
GATGCGATGC GTCGCGCGAT GATGGCGCAA GGACTGCCGG CGTCGCGTTT CCATCAGGAA
TCGTTCGAGA TGCGGTGA
 
Protein sequence
MQTVRLKVAF AGVIGGLSGL WLLSLAPDAW QQGFWETRAT LVYGCGVLAL GLMSVGVILA 
ARPVWFETPL GGLDKFYRLH RWLGISALGF ALVHWLLREG PSWITELGLV ALPPKPAHPQ
EDAALGFDLF RDLKHPAAEV GEWALYALVV LVAIALWKRF PYKYFFWTHR LMPLVYLALV
FHAFILIDKS YWTKPLGPVL ACLLIAGTVA AVIALFRRIG SSRKASGTIA TLSLYDDNQM
LEVGVRLETA WRGHEAGQFA FVDFDDAEAA HPFTISSSWQ NEGLLMFSIK GLGDYTRSLA
GSLHVGQGVV VEGPYGRFNF EDDSGRQIWI GGGVGVTPFI ARLKQLVGGG QSNPVDLFYA
TDTPDPGFVA PIAQLARQSG IAFHVVDGSQ GDRLTLEKLA ALVPEWKQAD VWFCGPSGFG
DAMRRAMMAQ GLPASRFHQE SFEMR